Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6635	Ivd	isovaleryl coenzyme A dehydrogenase	2		56357
Gene Ontology	isovaleryl-CoA dehydrogenase activity | mitochondrion | mitochondrion | oxidoreductase activity
Human Homolog	IVD[isovaleryl Coenzyme A dehydrogenase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATCTGAAAA GCCCCCTGAT GGGGGAGGGA (2) TGACCTTCTG TTGGAGAAGG 16.3 0.0163 Cb medulloblastoma AATCTGAAAA AGCTATAATT TGACCTTCTG TTGGAGAAGG 41.5 0.0415 P8 GC+1d culture AATCTGAAAA AGCTATAATT GGGGGAGGGA (2) TTGGAGAAGG 14.9 0.0149 P8 GC+SHH+1d culture AATCTGAAAA GGGGGAGGGA (2) TGACCTTCTG TGCACATACA (2) TGGAGAAGGG TGGCTCATCT (4) TTGGAGAAGG 10.7 0.0107 3T3 fibroblasts GCCCCCTGAT GCTCCCCTCC GGGGGAGGGA (2) 10.5 0.0105 E15 cortex AATCTGAAAA AGCTATAATT GCCCCCTGAT 14.7 0.0147 P1 cortex TTGGAGAAGG 9.1 0.0091 Hypothalamus AATCTGAAAA AGCTATAATT GCCCCCTGAT TGGCTCATCT (4) TTGGAGAAGG 18 0.018 E12.5 retina AATCTGAAAA AGCTATAATT GCTCCCCTCC TGACCTTCTG 7.6 0.0076 E14.5 retina AATCTGAAAA AGCTATAATT GCCCCCTGAT GCTCCCCTCC GGGGGAGGGA (2) 21.8 0.0218 E16.5 retina AATCTGAAAA AGCTATAATT GCCCCCTGAT TGACCTTCTG TTGGAGAAGG 18.1 0.0181 E18.5 retina AATCTGAAAA TGACCTTCTG TTGGAGAAGG 21.8 0.0218 P0.5 retina AATCTGAAAA GCCCCCTGAT TTGGAGAAGG 7.9 0.0079 P2.5 retina AATCTGAAAA TGACCTTCTG TGGAGAAGGG TTGGAGAAGG 12.4 0.0124 P4.5 retina AATCTGAAAA AGCTATAATT GGGGGAGGGA (2) TGACCTTCTG TGGAGAAGGG TGGCTCATCT (4) TTGGAGAAGG 25.8 0.0258 P6.5 retina AATCTGAAAA GGGGGAGGGA (2) TGACCTTCTG TTGGAGAAGG 20 0.02 P10.5 crx- retina AATCTGAAAA AGCTATAATT TTGGAGAAGG 5.7 0.0057 P10.5 crx+ retina AATCTGAAAA CCAAGTGTCC GCTCCCCTCC GGGGGAGGGA (2) TTGGAGAAGG 15.3 0.0153 Adult retinal CCAAGTGTCC GCTCCCCTCC TTGGAGAAGG 11.2 0.0112 ONL AATCTGAAAA AGCTATAATT CCAAGTGTCC TGCACATACA (2) 17.1 0.0171