Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6698	Sara1	SAR1a gene homolog 1 (S. cerevisiae)	10	10 B4	20224
Gene Ontology	endoplasmic reticulum | Golgi apparatus | GTP binding | intracellular protein transport | protein transport | small GTPase mediated signal transduction
Human Homolog	SARA1[SAR1a gene homolog 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 158 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGACTG (3) AAGGAGATGG CACTGGTTCA GCCCAGGGGG GCCCTGGCAG GTAAAGGGAG TCTTAGGTGA TGCAGTGTGC (2) TGTCCTGTTT 40.6 0.0406 Cb medulloblastoma AAGCAGACTG (3) CACACGCGCA (2) CACTCAAAAA CACTGGTTCA GCCCTGGCAG TGCAGTGTGC (2) TGCTCTTCTC (3) TGTCCTGTTT 25.3 0.0253 P8 GC+1d culture AAGCAGACTG (3) AAGGAGATGG AGAAAGCACG GAGTTTTATA GCCCTGGCAG GTAAAGGGAG TCTCACCCAC TGCAGTGTGC (2) TGCTCTTCTC (3) TGGCTCTTTC (3) TGTCCTGTTT 43.2 0.0432 P8 GC+SHH+1d culture AAAGGGAAAA (2) AAGCAGACTG (3) AAGGAGATGG CACTCAAAAA GAGTTTTATA GCCCTGGCAG GTAAAGGGAG TCTCACCACT TCTCACCCAC TGCAGTGTGC (2) TGTCCTGTTT TTTCCTGTTT 37.3 0.0373 3T3 fibroblasts AGAAAGCACG GCCCAGGGGG GTCATAGCTG (2) TGCAGTGTGC (2) TGTCCTGTTT 31.5 0.0315 E15 cortex AAGCAGACTG (3) GCCCAGGGGG GCCCTGGCAG GTCATAGCTG (2) TCTCCCCCAC TGCAGTGTGC (2) TGTCCTGTTT 59.2 0.0592 P1 cortex CACACGCGCA (2) GTAAAGGGAG TGCTCTTCTC (3) 13.5 0.0135 Hypothalamus AAGCAGACTG (3) CACACGCGCA (2) CACTGGTTCA CCAGAAGAGG (2) GCCCTGGCAG TCTCACCACT TCTCACCCAC TGTCCTGTTT TTTCCTGTTT 36.1 0.0361 E12.5 retina AAAGGGAAAA (2) AACAGGCTTG CCAGAAGAGG (2) GAATCCAAAG (3) TCTCACCCAC TGCAGTGTGC (2) TGCTCTTCTC (3) TGTCCTGTTT 26.5 0.0265 E14.5 retina AAGCAGACTG (3) CCAGAAGAGG (2) TCTCACCCAC TGTCCTGTTT TTTCCTGTTT 21.8 0.0218 E16.5 retina AAGCAGACTG (3) GAGTTTTATA TGCAGTGTGC (2) TGCTCTTCTC (3) TGTCCTGTTT TTTCCTGTTT 27.1 0.0271 E18.5 retina AAAGGGAAAA (2) AAGGAGATGG CACTGGTTCA GCCCTGGCAG TGCAGTGTGC (2) TGCTCTTCTC (3) TGTCCTGTTT 32.6 0.0326 P0.5 retina AAAGGGAAAA (2) AACAGGCTTG CCAGAAGAGG (2) GTCATAGCTG (2) TCTCACCCAC TCTCCCCCAC TGCTCTTCTC (3) TGTCCTGTTT TTTCCTGTTT 37.4 0.0374 P2.5 retina AAGCAGACTG (3) CACACGCGCA (2) GCCCTGGCAG GTAAAGGGAG GTCATAGCTG (2) TGCAGTGTGC (2) TGCTCTTCTC (3) TGTCCTGTTT 24.9 0.0249 P4.5 retina AAGCAGACTG (3) AGAAAGCACG CACTGGTTCA GTCATAGCTG (2) TGCTCTTCTC (3) TGTCCTGTTT TTTCCTGTTT 33.8 0.0338 P6.5 retina AAAGGGAAAA (2) AACAGGCTTG CACTGGTTCA CCAGAAGAGG (2) GAGTTTTATA GTCATAGCTG (2) TGCAGTGTGC (2) TGCTCTTCTC (3) TGTCCTGTTT TTTCCTGTTT 31.8 0.0318 P10.5 crx- retina AAGCAGACTG (3) AAGGAGATGG AGAAAGCACG CACACGCGCA (2) TCTTAGGTGA TGCTCTTCTC (3) TGGCTCTTTC (3) TGTCCTGTTT TTTCCTGTTT 63.4 0.0634 P10.5 crx+ retina AAGCAGACTG (3) AGAAAGCACG GCCCAGGGGG GCCCTGGCAG TCTCCCCCAC TGCAGTGTGC (2) TGCTCTTCTC (3) TGTCCTGTTT TTTCCTGTTT 30.5 0.0305 Adult retinal AAGCAGACTG (3) CACACGCGCA (2) CCAGAAGAGG (2) GAGTTTTATA GCCCTGGCAG GTCATAGCTG (2) TCTCCCCCAC TGCTCTTCTC (3) TGTCCTGTTT TTTCCTGTTT 30 0.03 ONL AAGCAGACTG (3) CACACGCGCA (2) CCAGAAGAGG (2) GTCATAGCTG (2) TGGCTCTTTC (3) TTTCCTGTTT 20.9 0.0209