Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6836	Arf1	ADP-ribosylation factor 1	11		11840
Gene Ontology	Golgi apparatus | Golgi apparatus | GTP binding | GTP binding | GTPase activity | intracellular protein transport | plasma membrane | protein transport | protein transport | protein transporter activity | receptor signaling protein activity | small GTPase mediated signal transduction | transporter activity
Human Homolog	ARF1[ADP-ribosylation factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 155 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGGGCTC AAGATGAGCT AGGATGCTAG AGGGTGCTAG CCTTTAATTC (3) TGCAGACGCA TGGGTGCTGG (2) TGTGAAGTAG (2) 35.8 0.0358 Cb medulloblastoma CCCCTTAAAA CCTTTAATTC (3) GAGATGGGGG GCTGGGCCTG GTGGGCCTGG TGCAGACGCA TGGCAACGTG (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 36.8 0.0368 P8 GC+1d culture AAAAGGGCTC ATCCAAACCC GAAAAGGGGG GAGATGGGGG TGGCAACGTG (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 54.6 0.0546 P8 GC+SHH+1d culture AAGATGAGCT ATCCAAACCC CAGCGGATGG CCTTTAATTC (3) GAGATGGGGG GTGGGCCTGG TGCAGACGCA TGGCAACGTG (2) TGGCATAACC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 57.5 0.0575 3T3 fibroblasts CAGCGGATGG CCTTTAATTC (3) TGCAGACGCA TGGGTGCTGG (2) TGTGAAGTAG (2) 49 0.049 E15 cortex TGGGTGCTGG (2) TGTGAAGTAG (2) 19.7 0.0197 P1 cortex AAAAGGGCTC ATCCAAACCC CATTTTAAAA (4) CCTTTAATTC (3) TGGGTGCTGG (2) TGTGAAGTAG (2) 58.9 0.0589 Hypothalamus ATCCAAACCC CCCCTTAAAA GAGATGGGGG GCTGGGCCTG TGGCAACGTG (2) TGGCATAACC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 38 0.038 E12.5 retina AAAAGGGCTC CAGCGGATGG CCTTTAATTC (3) GAGATGGGGG GTGCGCCTGG (2) TGGCAACGTG (2) TGGCATAACC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 45.3 0.0453 E14.5 retina AAGATGAGCT CCTTTAATTC (3) GTGGGGCTGG TGGGTGCTGG (2) TGTGAAGTAG (2) 72.9 0.0729 E16.5 retina AGGATGCTAG AGGATGGTAG AGGGTGCTAG ATCCAAACCC CAGCGGATGG CCTTTAATTC (3) GAGATGGGGG TGGCATAACC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 68.7 0.0687 E18.5 retina CATTTTAAAA (4) CCTTTAATTC (3) GAGATGGGGG GTGGGCCTGG TGCAGACGCA TGGCAACGTG (2) TGGCATAACC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 43.5 0.0435 P0.5 retina CAGCGGATGG CATTTTAAAA (4) CCTTTAATTC (3) GTGGGCCTGG TGGCAACGTG (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 35.5 0.0355 P2.5 retina CAGCGGATGG CCTTTAATTC (3) TGCAGACGCA TGGCAACGTG (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 44.1 0.0441 P4.5 retina AGGGTGCTAG CATTTTAAAA (4) CCTTTAATTC (3) GAAAAGGGGG GTGGGGCTGG TGGCAACGTG (2) TGGCATAACC (2) TGGGCAAAAC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 63.5 0.0635 P6.5 retina AAAAGGGCTC CCCCTTAAAA CCTTTAATTC (3) GAGATGGGGG TGGCAACGTG (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 48.4 0.0484 P10.5 crx- retina AGGATGCTAG ATCCAAACCC CAGCGGATGG CATTTTAAAA (4) CCTTTAATTC (3) GTGGGCCTGG TGGCAACGTG (2) TGGGCAAAAC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 70.8 0.0708 P10.5 crx+ retina AGGATGGTAG CCCCTTAAAA GAAAAGGGGG GTGCGCCTGG (2) GTGGGCCTGG TGCAGACGCA TGGCAACGTG (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 63.3 0.0633 Adult retinal AGGATGGTAG AGGGTGCTAG ATCCAAACCC CAGCGGATGG CATTTTAAAA (4) CCTTTAATTC (3) GAAAAGGGGG TGGCAACGTG (2) TGGGCAAAAC (2) TGGGTGCTGG (2) TGTGAAGTAG (2) 56 0.056 ONL CCTTTAATTC (3) GAAAAGGGGG GTGGGCCTGG GTGGGGCTGG TGGGTGCTGG (2) TGTGAAGTAG (2) 65 0.065