Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6952	Kpna1	karyopherin (importin) alpha 1	16		16646
Gene Ontology	intracellular protein transport | nucleus | protein transport | protein transporter activity | protein-nucleus import | transport
Human Homolog	KPNA1[karyopherin alpha 1 (importin alpha 5)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACCAGGA ACTACCTACC CATATTGTAC TCCACACCAA 11.3 0.0113 Cb medulloblastoma ACTACCTACC CCCACCTCCT (3) GATGCAAAAT 16.1 0.0161 P8 GC+1d culture ACTACCTACC CATATTGTAC CCCACCTCCT (3) GATGCAAAAT GGGCTTCCAG TCCACACCAA 13.7 0.0137 P8 GC+SHH+1d culture AAAACCAGGA CATATTGTAC TTAGTTTACT 3.6 0.0036 3T3 fibroblasts ACTACCTACC TTCCCAGCTC 7 0.007 E15 cortex ACTACCTACC TCACACCAGG (2) 9.8 0.0098 P1 cortex ACTACCTACC GGGCTTCCAG TTAGTTTACT 18.1 0.0181 Hypothalamus ACTACCTACC CATATTGTAC TCACACCAGG (2) TTAGTTTACT 9 0.009 E12.5 retina ACTACCTACC TAGTGGAAGT TCCACACCAA TTAGTTTACT TTCCCAGCTC 15.1 0.0151 E14.5 retina ACTACCTACC CATATTGTAC GATGCAAAAT 5.4 0.0054 E16.5 retina ACTACCTACC CATATTGTAC CCCACCTCCT (3) TCCACACCAA 14.4 0.0144 E18.5 retina ACTACCTACC CATATTGTAC GATGCAAAAT TCACACCAGG (2) TTAGTTTACT 9 0.009 P0.5 retina ACTACCTACC CCCACCTCCT (3) TCACACCAGG (2) TCCACACCAA 9.9 0.0099 P2.5 retina GATGCAAAAT TAGTGGAAGT TCACACCAGG (2) 5.4 0.0054 P4.5 retina GGGCTTCCAG TCACACCAGG (2) TCCACACCAA 8 0.008 P6.5 retina ACTACCTACC CATATTGTAC CCCACCTCCT (3) GATGCAAAAT GGGCTTCCAG TCCACACCAA TTAGTTTACT TTCCCAGCTC 20.2 0.0202 P10.5 crx- retina GATGCAAAAT TCACACCAGG (2) TCCACACCAA TTCCCAGCTC 7.6 0.0076 P10.5 crx+ retina ACTACCTACC TCACACCAGG (2) TTCCCAGCTC 15.3 0.0153 ONL AAAACCAGGA ACTACCTACC 3.8 0.0038