Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7883	Apc	adenomatosis polyposis coli	18	18 B1 (18 15.0 cM)	11789
Gene Ontology	anterior/posterior pattern formation | axis specification | beta-catenin binding | cytoplasm | dorsal/ventral pattern formation | microtubule binding | negative regulation of cell cycle | nucleus | peroxidase activity | protein binding | regulation of cell cycle | Wnt receptor signaling pathway | Wnt receptor signaling pathway
Human Homolog	APC[adenomatosis polyposis coli]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAATAAAA (3) GCGTTTGGAG (2) GTCAGATAAT GTGTGCAGAG TGGATCAGCC 29.4 0.0294 Cb medulloblastoma AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC GTGTGCAGAG TGCATCCTGT TGGATCAGCC 41.5 0.0415 P8 GC+1d culture AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC GTCAGATAAT GTGTGCAGAG TGGATCAGCC 27.4 0.0274 P8 GC+SHH+1d culture AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC GTCAGATAAT GTGTGCAGAG TGGATCAGCC 25.7 0.0257 3T3 fibroblasts GAGGGAAGGA GCGTTTGGAG (2) GTGTGCAGAG 14 0.014 E15 cortex GCGTTTGGAG (2) GGCACTGTCC GTGTGCAGAG 29.6 0.0296 P1 cortex AAAAATAAAA (3) GTGTGCAGAG 9 0.009 Hypothalamus AAAAATAAAA (3) AATCAGAATA GAGGGAAGGA GCGTTTGGAG (2) TGGATCAGCC 23.5 0.0235 E12.5 retina AAAAATAAAA (3) AATCAGAATA GAGGGAAGGA GCGTTTGGAG (2) GGCACTGTCC GGGAACCACA GTGTGCAGAG 17 0.017 E14.5 retina AAAAATAAAA (3) GGCACTGTCC 18.2 0.0182 E16.5 retina AAAAATAAAA (3) GTGTGCAGAG 10.9 0.0109 E18.5 retina AAAAATAAAA (3) GCGTTTGGAG (2) GGGAAAGGAA GTGTGCAGAG TGCATCCTGT TGGATCAGCC 23.6 0.0236 P0.5 retina AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC GTCAGATAAT GTGTGCAGAG TGCATCCTGT TGGATCAGCC 27.5 0.0275 P2.5 retina AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC GGGAAAGGAA GTGTGCAGAG TGCATCCTGT TGGATCAGCC 23 0.023 P4.5 retina AAAAATAAAA (3) GCGTTTGGAG (2) GTCAGATAAT TGCATCCTGT 27.7 0.0277 P6.5 retina AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC 39.9 0.0399 P10.5 crx- retina AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC GTCAGATAAT GTGTGCAGAG TGGATCAGCC 13.2 0.0132 P10.5 crx+ retina AAAAATAAAA (3) GAGGGAAGGA GCGTTTGGAG (2) GGCACTGTCC GGGAACCACA GTCAGATAAT TGCATCCTGT 36.4 0.0364 Adult retinal AAAAATAAAA (3) GCGTTTGGAG (2) GGCACTGTCC GGGAAAGGAA GTGTGCAGAG 13.2 0.0132 ONL GCGTTTGGAG (2) GTGTGCAGAG TGCATCCTGT 13.4 0.0134