Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.88212	Tuba6	tubulin, alpha 6	15		22146
Gene Ontology	microtubule | microtubule-based movement | microtubule-based process | mitochondrion | structural constituent of cytoskeleton | structural molecule activity
Human Homolog	TUBA6[tubulin alpha 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 191 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTCACCAA (3) ATGTCTCAAA CAAACAGCTC CTGAGCAACA (2) GCATCCAGCC GCGAGGGTCA GCTGCCCTAG (2) GCTTGCTGCC GTAGACAATG GTAGGCTTTC GTTGCTGCTT TGCCCCGGGC TGCTGCCATT (2) TTTACACTGC (2) 823.8 0.8238 Cb medulloblastoma AGCTCACCAA (3) ATGTCTCAAA GCATCCAGCC GCGAGGGTCA GCTGCCCTAG (2) GTAGACAATG TGCCCCGGGC TTTACACTGC (2) 251.9 0.2519 P8 GC+1d culture AGCTCACCAA (3) ATGTCTCAAA CTGAGCAACA (2) GCATCCAGCC GCGAGGGTCA GCTGCCCTAG (2) GCTTGCTGCC GGCTTCTTGT GTAGACAATG GTAGGCTTTC TGCCCCGGGC TGCTGCCATT (2) 717.9 0.7179 P8 GC+SHH+1d culture AGCTCACCAA (3) ATAGCAACGG ATGTCTCAAA CACACAGCTC CTGAGCAACA (2) GCATCCAGCC GCTGCCCTAG (2) GCTTGCTGCC GGCTTCTTGT GTAGACAATG GTAGGCTTTC GTTGCTGCTT TGCCCCGGGC TGCTGCCATT (2) TTTACACTGC (2) 729.7 0.7297 3T3 fibroblasts AGCTCACCAA (3) ATAGCAACGG ATGTCTCAAA CTGAGCAACA (2) GCTGCCCTAG (2) GTAGACAATG TGCTGCCATT (2) 448.7 0.4487 E15 cortex AGCTCACCAA (3) ATGTCTCAAA CTGAGCAACA (2) GCATCCAGCC GCGAGGGTCA GCTGCCCTAG (2) GCTTGCTGCC GGCTTCTTGT TGCCCCGGGC TGCTGCCATT (2) 2077.9 2.0779 P1 cortex AGCTCACCAA (3) ATGTCTCAAA CACACAGCTC GCATCCAGCC GCTGCCCTAG (2) GCTTGCTGCC GGCTTCTTGT TGCCCCGGGC TTTACACTGC (2) 1336 1.336 Hypothalamus AGCTCACCAA (3) ATGTCTCAAA CAAACAGCTC CTGAGCAACA (2) GCGAGGGTCA GCTGCCCTAG (2) GTAGACAATG GTAGGCTTTC GTTGCTGCTT TGCCCCGGGC TTTACACTGC (2) 331.4 0.3314 E12.5 retina AGCTCACCAA (3) ATGTCTCAAA CAAACAGCTC CTGAGCAACA (2) GCGAGGGTCA GCTGCCCTAG (2) TGCTGCCATT (2) TTTACACTGC (2) 1010.1 1.0101 E14.5 retina AGCTCACCAA (3) ATGTCTCAAA CACACAGCTC CTGAGCAACA (2) GCGAGGGTCA GCTGCCCTAG (2) GTAGACAATG TGCCCCGGGC TGCTGCCATT (2) 839.8 0.8398 E16.5 retina AGCTCACCAA (3) ATGTCTCAAA CACACAGCTC CTGAGCAACA (2) GCATCCAGCC GCGAGGGTCA GCTGCCCTAG (2) GCTTGCTGCC GTAGACAATG GTAGGCTTTC GTTGCTGCTT TGCCCCGGGC TGCTGCCATT (2) TTTACACTGC (2) 889.1 0.8891 E18.5 retina AGCTCACCAA (3) ATGTCTCAAA GCATCCAGCC GCGAGGGTCA GCTGCCCTAG (2) GTAGACAATG TGCCCCGGGC TGCTGCCATT (2) TTTACACTGC (2) 969.3 0.9693 P0.5 retina AGCTCACCAA (3) ATGTCTCAAA CTGAGCAACA (2) GCGAGGGTCA GCTGCCCTAG (2) GCTTGCTGCC GTAGACAATG GTAGGCTTTC TGCCCCGGGC TGCTGCCATT (2) TTTACACTGC (2) 757.6 0.7576 P2.5 retina AGCTCACCAA (3) ATGTCTCAAA CTGAGCAACA (2) GCATCCAGCC GCTGCCCTAG (2) GTAGACAATG TGCTGCCATT (2) TTTACACTGC (2) 723.4 0.7234 P4.5 retina AGCTCACCAA (3) ATGTCTCAAA CACACAGCTC CTGAGCAACA (2) GCTGCCCTAG (2) TGCTGCCATT (2) TTTACACTGC (2) 610.3 0.6103 P6.5 retina AGCTCACCAA (3) ATGTCTCAAA CTGAGCAACA (2) GCATCCAGCC GCGAGGGTCA GCTGCCCTAG (2) GCTTGCTGCC GTAGACAATG GTTGCTGCTT TGCCCCGGGC TGCTGCCATT (2) TGTACACATA 413.7 0.4137 P10.5 crx- retina ATGTCTCAAA CTGAGCAACA (2) GCATCCAGCC GCTGCCCTAG (2) GCTTGCTGCC GGCTTCTTGT GTAGACAATG GTAGGCTTTC TGCCCCGGGC TTTACACTGC (2) 572.4 0.5724 P10.5 crx+ retina AGCTCACCAA (3) ATGTCTCAAA GCTGCCCTAG (2) GCTTGCTGCC TTTACACTGC (2) 455.5 0.4555 Adult retinal ATGTCTCAAA GCTGCCCTAG (2) GGCTTCTTGT GTAGACAATG TGCCCCGGGC TTTACACTGC (2) 170.4 0.1704 ONL AGCTCACCAA (3) ATGTCTCAAA GCTGCCCTAG (2) TGCCCCGGGC TGTACACATA TTTACACTGC (2) 178 0.178