| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACCTTCAAAA (2) AGGAGAGGGT CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5) TTATCATACC (2)
| 105.9 | 0.1059 |
| Cb medulloblastoma | AAAAGAAAAT (2) AGGAGAGGGT CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GGGAAAAAAA (5)
| 369.9 | 0.3699 |
| P8 GC+1d culture | AAAAGAAAAT (2) CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GAGAGAGACT GCGCACTGTG (3) GGCAGCCAGA (2) GGGAAAAAAA (5) GGGAGGCATT (2)
| 88.8 | 0.0888 |
| P8 GC+SHH+1d culture | AAAAGAAAAT (2) AGGAGAGGGT CAAAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GAGAGAGACT GCGCACTGTG (3) GGCAGCCAGA (2) GGGAAAAAAA (5)
| 160.3 | 0.1603 |
| 3T3 fibroblasts | ATGTGTGCAA (2)
| 3.5 | 0.0035 |
| E15 cortex | CAAAAAAAAA (2) GAAAAAAAAA (2) GGCAGCCAGA (2)
| 98.9 | 0.0989 |
| P1 cortex | ATGTGTGCAA (2) CAAAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5)
| 90.8 | 0.0908 |
| Hypothalamus | CAAAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5) GGGAGGCATT (2) TTATCATACC (2)
| 157.5 | 0.1575 |
| E12.5 retina | CAAAAAAAAA (2) GAAAAAAAAA (2)
| 69.4 | 0.0694 |
| E14.5 retina | CAAAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GGGAAAAAAA (5) GGGAGGCATT (2)
| 50.9 | 0.0509 |
| E16.5 retina | AGGAGAGGGT ATGTGTGCAA (2) CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5) TTATCATACC (2)
| 52.4 | 0.0524 |
| E18.5 retina | AAAAGAAAAT (2) CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GGGAAAAAAA (5) TTATCATACC (2)
| 123.6 | 0.1236 |
| P0.5 retina | AGGAGAGGGT CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GGCAGCCAGA (2) GGGAAAAAAA (5) TTATCATACC (2)
| 192.4 | 0.1924 |
| P2.5 retina | ACCTTCAAAA (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5) TTATCATACC (2)
| 151.4 | 0.1514 |
| P4.5 retina | AGGAGAGGGT CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5)
| 111 | 0.111 |
| P6.5 retina | AAAAGAAAAT (2) CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GGGAAAAAAA (5) GGGAGGCATT (2)
| 103.4 | 0.1034 |
| P10.5 crx- retina | CAAAAAAAAA (2) CCTAAAAAAA (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5) GGGAGGCATT (2) TTATCATACC (2)
| 52 | 0.052 |
| P10.5 crx+ retina | ACCTTCAAAA (2) AGGAGAGGGT CAAAAAAAAA (2) CCTAAAAAAA (2) CCTAATGTCT (2) GAAAAAAAAA (2) GGGAAAAAAA (5) TTATCATACC (2)
| 111.4 | 0.1114 |
| Adult retinal | CAAAAAAAAA (2) CCTAAAAAAA (2) GAAAAAAAAA (2) GCGCACTGTG (3) GGGAAAAAAA (5) GGGAGGCATT (2)
| 79.8 | 0.0798 |
| ONL | AAAAGAAAAT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GGCAGCCAGA (2) GGGAAAAAAA (5)
| 76.5 | 0.0765 |