Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9925	Idh1	isocitrate dehydrogenase 1 (NADP+), soluble	1	1 29.8 cM	15926
Gene Ontology	cytosol | glutathione metabolism | glyoxylate cycle | isocitrate dehydrogenase (NADP+) activity | isocitrate dehydrogenase (NADP+) activity | main pathways of carbohydrate metabolism | metabolism | oxidoreductase activity | response to oxidative stress | tricarboxylic acid cycle
Human Homolog	IDH1[isocitrate dehydrogenase 1 (NADP+), soluble]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAATAATG 4.9 0.0049 Cb medulloblastoma GGCAATAATG 2.3 0.0023 P8 GC+1d culture GACAACAGGG (2) GGCAATAATG GTGGGCCCAG TACCAGAAAG (2) TATGTGTCCA 20.5 0.0205 P8 GC+SHH+1d culture GACAACAGGG (2) GGCAATAATG TATGTGTCCA 7.1 0.0071 3T3 fibroblasts GGCAATAATG 10.5 0.0105 E15 cortex GGCAATAATG 14.8 0.0148 P1 cortex GGCAATAATG TGGCCAAGCT 27.3 0.0273 Hypothalamus GACAACAGGG (2) GGCAATAATG 5.4 0.0054 E12.5 retina GGCAATAATG TACCAGAAAG (2) 15 0.015 E14.5 retina GGCAATAATG 10.9 0.0109 E16.5 retina GACAACAGGG (2) GGCAATAATG TATGTGTCCA 18.1 0.0181 E18.5 retina GGCAATAATG 7.3 0.0073 P0.5 retina GGCAATAATG 21.6 0.0216 P2.5 retina GGCAATAATG TACCAGAAAG (2) 17.6 0.0176 P4.5 retina GACAACAGGG (2) GGCAATAATG GTGGGCCCAG TACCAGAAAG (2) TGACTTTTTT 17.9 0.0179 P6.5 retina CTCCAATGTA GGCAATAATG GTGGGCCCAG TGACTTTTTT 13.4 0.0134 P10.5 crx- retina GGCAATAATG 5.6 0.0056 P10.5 crx+ retina GGCAATAATG TACCAGAAAG (2) TGGCCAAGCT 11.5 0.0115 Adult retinal GACAACAGGG (2) GGCAATAATG TACCAGAAAG (2) 11.2 0.0112 ONL AGGCCAGGTG CTCCAATGTA GGCAATAATG TACCAGAAAG (2) TGACTTTTTT 19.1 0.0191