| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATGGATGCA (2) CGCTTTAGGT GAGTTCAGGA (2)
| 18 | 0.018 |
| Cb medulloblastoma | CAGCCAGGCA (2) CTGCCCCCTC
| 6.9 | 0.0069 |
| P8 GC+1d culture | AATGGATGCA (2) ACCGCCTGGA CGCTTTAGGT CTGCCCCCTC GAAATCTGGC
| 28.4 | 0.0284 |
| P8 GC+SHH+1d culture | AATGGATGCA (2) ACCGCCTGGA CCCAGGTCTA CGCTTTAGGT CTGCCCCCTC GAAATCTGGC
| 29.2 | 0.0292 |
| 3T3 fibroblasts | CGCTTTAGGT GAAATCTGGC
| 7 | 0.007 |
| E15 cortex | AATGGATGCA (2) CTGCCCCCTC GAAATCTGGC
| 29.6 | 0.0296 |
| P1 cortex | AATGGATGCA (2) CGCTTTAGGT GAAATCTGGC
| 22.6 | 0.0226 |
| Hypothalamus | AATGGATGCA (2) CAGCCAGGCA (2)
| 12.7 | 0.0127 |
| E12.5 retina | AATGGATGCA (2) CGCTTTAGGT
| 20.7 | 0.0207 |
| E14.5 retina | AATGGATGCA (2) GGAACCAAGC (3)
| 7.3 | 0.0073 |
| E16.5 retina | AATGGATGCA (2) CGCTTTAGGT
| 16.3 | 0.0163 |
| E18.5 retina | AATGGATGCA (2) ACCGCCTGGA
| 9.1 | 0.0091 |
| P0.5 retina | AATGGATGCA (2) GAAATCTGGC GGAACCAAGC (3)
| 19.6 | 0.0196 |
| P2.5 retina | AATGGATGCA (2) CGCTTTAGGT
| 14.1 | 0.0141 |
| P4.5 retina | AATGGATGCA (2) CCCAGGTCTA CGCTTTAGGT
| 19.9 | 0.0199 |
| P6.5 retina | AATGGATGCA (2) CTGCCCCCTC
| 15 | 0.015 |
| P10.5 crx- retina | AATGGATGCA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AATGGATGCA (2) CCCAGGTCTA
| 15.4 | 0.0154 |
| Adult retinal | AATGGATGCA (2) GAAATCTGGC
| 9.3 | 0.0093 |
| ONL | AATGGATGCA (2) CGCTTTAGGT GAAATCTGGC GAGTTCAGGA (2)
| 11.4 | 0.0114 |