| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAACTCAGTC (2) CCCTTCTGCC (2) TATTGGCTCC (3)
| 9.8 | 0.0098 |
| Cb medulloblastoma | CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 13.8 | 0.0138 |
| P8 GC+1d culture | CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | TATTGGCTCC (3) TGCTAGGATA (2)
| 4.6 | 0.0046 |
| E15 cortex | CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 14.7 | 0.0147 |
| P1 cortex | CCCTTCTGCC (2) TATTGGCTCC (3)
| 9 | 0.009 |
| Hypothalamus | CAACTCAGTC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 10.8 | 0.0108 |
| E12.5 retina | CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 5.7 | 0.0057 |
| E14.5 retina | TGCTAGGATA (2)
| 5.5 | 0.0055 |
| E16.5 retina | CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 9 | 0.009 |
| E18.5 retina | CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 7.2 | 0.0072 |
| P0.5 retina | CAACTCAGTC (2) CCCTTCTGCC (2)
| 9.9 | 0.0099 |
| P2.5 retina | TATTGGCTCC (3) TGCTAGGATA (2)
| 7 | 0.007 |
| P4.5 retina | TATTGGCTCC (3)
| 5.9 | 0.0059 |
| P6.5 retina | CCCTTCTGCC (2) TATTGGCTCC (3)
| 5 | 0.005 |
| P10.5 crx- retina | CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | TATTGGCTCC (3)
| 7.7 | 0.0077 |
| Adult retinal | TGCTAGGATA (2)
| 1.9 | 0.0019 |
| ONL | TATTGGCTCC (3)
| 3.8 | 0.0038 |