Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260227	Pak1	p21 (CDKN1A)-activated kinase 1	7	7 46.5 cM	18479
Gene Ontology	ATP binding | axon | cytoplasm | dendrite morphogenesis | focal adhesion | growth cone | nucleus | protein amino acid phosphorylation | protein binding | protein kinase activity | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PAK1[p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCAGAGGTC 3.3 0.0033 Cb medulloblastoma CTCAGAGGTC 18.5 0.0185 P8 GC+1d culture CTCAGAGGTC GAGGGAACTG TGCCAAGCCT (2) 6.8 0.0068 P8 GC+SHH+1d culture CTCAGAGGTC GAGGGAACTG TGCCAAGCCT (2) 9.3 0.0093 E15 cortex CTCAGAGGTC TGCCAAGCCT (2) 24.7 0.0247 P1 cortex CTCAGAGGTC 13.6 0.0136 Hypothalamus CTCAGAGGTC TGCCAAGCCT (2) 21.7 0.0217 E12.5 retina CTCAGAGGTC GAGGGAACTG TGCCAAGCCT (2) 7.6 0.0076 E14.5 retina CTCAGAGGTC GAGGGAACTG 9.1 0.0091 E16.5 retina CTCAGAGGTC TGCCAAGCCT (2) 12.6 0.0126 E18.5 retina CTCAGAGGTC TGCCAAGCCT (2) 9.1 0.0091 P0.5 retina CTCAGAGGTC TGCCAAGCCT (2) 5.9 0.0059 P2.5 retina CTCAGAGGTC TGCCAAGCCT (2) 10.5 0.0105 P4.5 retina CTCAGAGGTC GAGGGAACTG TGCCAAGCCT (2) 11.9 0.0119 P6.5 retina CTCAGAGGTC TGCCAAGCCT (2) 10 0.01 P10.5 crx- retina CTCAGAGGTC 9.3 0.0093 Adult retinal CTCAGAGGTC 5.6 0.0056 ONL TGCCAAGCCT (2) 1.9 0.0019