Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262294	AW556556	expressed sequence AW556556	17		106817
Mm.262294	Dep1	diabetic embryopathy 1	17		170624
Mm.262294	Qk	quaking	17	17 5.9 cM	19317
Gene Ontology	cytoplasm | locomotory behavior | muscle cell differentiation | nerve ensheathment | nucleic acid binding | nucleus | RNA binding | spermatogenesis | vasculogenesis
Human Homolog	QKI[quaking homolog, KH domain RNA binding (mouse)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTTTGGAA (4) CTGTGTATGT (3) GCTTTTACAT (3) GTGACCTCTC (3) TAATGAAATT (3) TTGTTTGTAA (3) 24.4 0.0244 Cb medulloblastoma ACTTTTGGAA (4) TAAGATAATG (3) TAATTTTGGA (4) TCAAGTGAGC (3) TTGTTTGTAA (3) 48.5 0.0485 P8 GC+1d culture GTGACCTCTC (3) TAAGATAATG (3) TAATGAAATT (3) TTGTTTGTAA (3) 7.9 0.0079 P8 GC+SHH+1d culture GTGACCTCTC (3) TAAGATAATG (3) TAATGAAATT (3) TAATTTTGGA (4) TCAAGTGAGC (3) TTGTTTGTAA (3) 11.8 0.0118 E15 cortex ACTTTTGGAA (4) TAATGAAATT (3) 14.8 0.0148 P1 cortex CTGTGTATGT (3) TAATGAAATT (3) 22.7 0.0227 Hypothalamus ACTTTTGGAA (4) CCTGCCTGCT (4) GCTTTTACAT (3) GTGACCTCTC (3) TAAGATAATG (3) TCAAGTGAGC (3) TTGTTTGTAA (3) 28.9 0.0289 E12.5 retina ACTTTTGGAA (4) GCAGAGGATG (4) TAAGATAATG (3) TCAAGTGAGC (3) TTGTTTGTAA (3) 20.7 0.0207 E14.5 retina GCAGAGGATG (4) TAAGATAATG (3) 3.6 0.0036 E16.5 retina TAAGATAATG (3) TAATGAAATT (3) 3.6 0.0036 E18.5 retina CCTGCCTGCT (4) GCTTTTACAT (3) TAAGATAATG (3) TAATGAAATT (3) TTGTTTGTAA (3) 14.5 0.0145 P0.5 retina GCTTTTACAT (3) GTGACCTCTC (3) TAATGAAATT (3) TCAAGTGAGC (3) TTGTTTGTAA (3) 11.9 0.0119 P2.5 retina ACTTTTGGAA (4) GCTTTTACAT (3) TAAGATAATG (3) TAATGAAATT (3) TCAAGTGAGC (3) TTGTTTGTAA (3) 17.8 0.0178 P4.5 retina CCTGCCTGCT (4) TTGTTTGTAA (3) 9.9 0.0099 P6.5 retina TAAGATAATG (3) TAATGAAATT (3) TTGTTTGTAA (3) 6.7 0.0067 P10.5 crx- retina ACTTTTGGAA (4) 1.9 0.0019 P10.5 crx+ retina TAATGAAATT (3) TTGTTTGTAA (3) 3.8 0.0038 ONL CTGTGTATGT (3) 1.9 0.0019