| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGCTGCCC (3) GTCTGTGCCC (3)
| 4.9 | 0.0049 |
| Cb medulloblastoma | TCTACCATCC (2) TGCGTGCGCA (2)
| 6.9 | 0.0069 |
| P8 GC+1d culture | GTCTGTGCCC (3) TCTACCATCC (2)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | GTCTGTGCCC (3) TCTACCATCC (2) TGCGTGCGCA (2)
| 14 | 0.014 |
| 3T3 fibroblasts | GTCTGTGCCC (3) TCTACCATCC (2)
| 14 | 0.014 |
| E15 cortex | TCTACCATCC (2)
| 4.9 | 0.0049 |
| P1 cortex | TCTACCATCC (2)
| 4.5 | 0.0045 |
| Hypothalamus | GTCTGTGCCC (3) TGCGTGCGCA (2)
| 7.2 | 0.0072 |
| E12.5 retina | AAGGCTGCCC (3)
| 1.9 | 0.0019 |
| E14.5 retina | GTCTGTGCCC (3)
| 5.5 | 0.0055 |
| E16.5 retina | TCTACCATCC (2)
| 1.8 | 0.0018 |
| E18.5 retina | GTCTGTGCCC (3) TGCGTGCGCA (2)
| 5.4 | 0.0054 |
| P0.5 retina | GTCTGTGCCC (3) TCTACCATCC (2)
| 11.8 | 0.0118 |
| P2.5 retina | GTCTGTGCCC (3) TCTACCATCC (2) TGCGTGCGCA (2)
| 10.6 | 0.0106 |
| P4.5 retina | GTCTGTGCCC (3)
| 4 | 0.004 |
| P6.5 retina | GTCTGTGCCC (3) TCTACCATCC (2)
| 10 | 0.01 |
| P10.5 crx- retina | GTCTGTGCCC (3) TCTACCATCC (2)
| 9.3 | 0.0093 |
| P10.5 crx+ retina | GTCTGTGCCC (3) TGCGTGCGCA (2)
| 5.7 | 0.0057 |
| Adult retinal | TCTACCATCC (2)
| 5.6 | 0.0056 |
| ONL | AAGGCTGCCC (3) GTCTGTGCCC (3) TCTACCATCC (2)
| 5.7 | 0.0057 |