Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.272998
Mesdc1
mesoderm development candidate 1
7
80889
Human Homolog
MESDC1[mesoderm development candidate 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGGTAAAA
(
3
)
GTGTGAAAAA
TACTGGAGTA
11.4
0.0114
Cb medulloblastoma
CAGGGTAAAA
(
3
)
TACTGGAGTA
9.2
0.0092
P8 GC+1d culture
CCGCCTGCCA
(
2
)
GTGTGAAAAA
TACTGGAGTA
8
0.008
P8 GC+SHH+1d culture
CAGGGTAAAA
(
3
)
TACTGGAGTA
7.1
0.0071
3T3 fibroblasts
TACTGGAGTA
3.5
0.0035
Hypothalamus
GTGTGAAAAA
TACTGGAGTA
3.6
0.0036
E12.5 retina
GTGTGAAAAA
TACTGGAGTA
13.2
0.0132
E14.5 retina
GCAGGAGTCC
GTGTGAAAAA
TACTGGAGTA
7.2
0.0072
E16.5 retina
TACTGGAGTA
5.4
0.0054
E18.5 retina
CAGGGTAAAA
(
3
)
GTGTGAAAAA
TACTGGAGTA
9.1
0.0091
P0.5 retina
TACTGGAGTA
5.9
0.0059
P2.5 retina
CCGCCTGCCA
(
2
)
TACTGGAGTA
3.6
0.0036
P4.5 retina
CAGGGTAAAA
(
3
)
2
0.002
P6.5 retina
CAGGGTAAAA
(
3
)
GCAGGAGTCC
3.4
0.0034
P10.5 crx- retina
TACTGGAGTA
5.6
0.0056
P10.5 crx+ retina
CAGGGTAAAA
(
3
)
1.9
0.0019
Adult retinal
CCGCCTGCCA
(
2
)
GCAGGAGTCC
TACTGGAGTA
5.7
0.0057
ONL
TACTGGAGTA
3.8
0.0038
