| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGAGGCACCA (2) TCCCCCTCAA (2)
| 4.9 | 0.0049 |
| P8 GC+1d culture | TTATATTTTC
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | AGACTATGCG CCCACGGGAC TCCCCCTCAA (2) TTAAATGGAA (2) TTATATTTTC
| 38.8 | 0.0388 |
| 3T3 fibroblasts | CCCACGGGAC
| 14 | 0.014 |
| E15 cortex | CCCACGGGAC
| 4.9 | 0.0049 |
| P1 cortex | AGACTATGCG AGAGGCACCA (2)
| 13.6 | 0.0136 |
| Hypothalamus | AGAGGCACCA (2) TCCCCCTCAA (2)
| 9 | 0.009 |
| E12.5 retina | AAAGCACACA TCCCCCCTCA (2) TCCCCCTCAA (2)
| 67.7 | 0.0677 |
| E14.5 retina | AAAGCACACA AGAGGCACCA (2) GGTGTGATCC TCCCCCTCAA (2)
| 89.2 | 0.0892 |
| E16.5 retina | AAAGCACACA AGAGGCACCA (2) GGTGTGATCC TCCCCCCTCA (2) TCCCCCTCAA (2)
| 56.1 | 0.0561 |
| E18.5 retina | AAAGCACACA GGTGTGATCC TCCCCCTCAA (2)
| 65.4 | 0.0654 |
| P0.5 retina | AGAGGCACCA (2)
| 5.9 | 0.0059 |
| P2.5 retina | GGTGTGATCC
| 3.5 | 0.0035 |
| P6.5 retina | GGTGTGATCC
| 1.7 | 0.0017 |
| P10.5 crx- retina | CCCACGGGAC GGTGTGATCC TCCCCCCTCA (2) TCCCCCTCAA (2)
| 16.8 | 0.0168 |
| P10.5 crx+ retina | TCCCCCCTCA (2) TCCCCCTCAA (2) TTAAATGGAA (2)
| 5.7 | 0.0057 |
| Adult retinal | CCCACGGGAC GGTGTGATCC TCCCCCTCAA (2) TTATATTTTC
| 13.1 | 0.0131 |
| ONL | TCCCCCCTCA (2) TTATATTTTC
| 3.8 | 0.0038 |