| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGCTCTATT (4) CACAAAATAA (4) CCCAAAATAA (4) GATTTTTCTT (3) TGGCTTTTAT (6)
| 14.6 | 0.0146 |
| Cb medulloblastoma | CAACAAAAGT (3) CACAAAATAA (4)
| 9.2 | 0.0092 |
| P8 GC+1d culture | ATGCTCTATT (4) CACAAAATAA (4) TGGCTTTTAT (6)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | ATGCTCTATT (4) CACAAAATAA (4) CCCAAAATAA (4) GATTTTTCTT (3) TGGCTTTTAT (6)
| 15.3 | 0.0153 |
| 3T3 fibroblasts | ATGCTCTATT (4)
| 3.5 | 0.0035 |
| E15 cortex | GAAGCATTTA (3)
| 4.9 | 0.0049 |
| Hypothalamus | CACAAAATAA (4)
| 1.8 | 0.0018 |
| E12.5 retina | CACAAAATAA (4)
| 1.9 | 0.0019 |
| E14.5 retina | CACAAAATAA (4)
| 3.6 | 0.0036 |
| E16.5 retina | ATGCTCTATT (4) GATTTTTCTT (3)
| 3.6 | 0.0036 |
| E18.5 retina | ATGCTCTATT (4) CAACAAAAGT (3) CACAAAATAA (4) TGGCTTTTAT (6)
| 7.2 | 0.0072 |
| P0.5 retina | ATGCTCTATT (4) GATTTTTCTT (3)
| 5.9 | 0.0059 |
| P2.5 retina | ATGCTCTATT (4) CACAAAATAA (4) CCCAAAATAA (4) GAAGCATTTA (3)
| 10.6 | 0.0106 |
| P4.5 retina | ATGCTCTATT (4) CAACAAAAGT (3) CACAAAATAA (4) GATTTTTCTT (3)
| 12 | 0.012 |
| P6.5 retina | CACAAAATAA (4) GAAGCATTTA (3)
| 10 | 0.01 |
| P10.5 crx- retina | CACAAAATAA (4)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | ATGCTCTATT (4) CACAAAATAA (4)
| 9.6 | 0.0096 |
| Adult retinal | CACAAAATAA (4)
| 1.9 | 0.0019 |
| ONL | CACAAAATAA (4) GATTTTTCTT (3)
| 7.6 | 0.0076 |