Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291442	Sparc	secreted acidic cysteine rich glycoprotein	11	11 B1 (11 29.9 cM)	20692
Gene Ontology	basement membrane | calcium ion binding | extracellular matrix | extracellular space
Human Homolog	SPARC[secreted protein, acidic, cysteine-rich (osteonectin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAATTTCA (2) CAAACTCTCA CGTGACTGGC (2) GAACATTGCA (2) GAAGTTTGGC GGTGGGCCAG 44 0.044 Cb medulloblastoma CAAACTCTCA CAAACTTTCA CTAGAAACTT GAACATTGCA (2) GCAAGGTGTG GGGATGAGGG GGTGGGGCAG (3) TTCCCCCTCA 147.8 0.1478 P8 GC+1d culture CAAAATTTCA (2) CAAACTCTCA CTAGAAACTT GAACATTGCA (2) GGTGGGCCAG TTCCCCCTCA 55.8 0.0558 P8 GC+SHH+1d culture CAAACTCTCA CTAGAAACTT GAACATTGCA (2) GCCTCAGAGT GGTGGGCCAG 44.5 0.0445 3T3 fibroblasts CAAACTCTCA GAACATTGCA (2) GGTGGGCCAG 354 0.354 E15 cortex CAAACTCTCA 19.8 0.0198 P1 cortex CAAACTCTCA GAACATTGCA (2) 36.4 0.0364 Hypothalamus AAATGCTTGG CAAAATTTCA (2) CAAACTCTCA CGTGACTGGC (2) CTAGAAACTT GAACATTGCA (2) GCAAGGTGTG GCCTCAGAGT GGGATGAGGG GGTGGGCCAG GGTGGGGCAG (3) TTCCCCCTCA 316.8 0.3168 E12.5 retina AGAACGAGGA CAAACTCTCA CGTGACTGGC (2) GAACATTGCA (2) GGTGGGCCAG 75.2 0.0752 E14.5 retina CAAAATTTCA (2) CAAACTCTCA CTAGAAACTT GAACATTGCA (2) GCCTCAGAGT GGGATGAGGG GGTGGGCCAG 30.8 0.0308 E16.5 retina CAAAATTTCA (2) CAAACTCTCA GAACATTGCA (2) GGGATGAGGG TTCCCCCTCA 30.7 0.0307 E18.5 retina CAAAATTTCA (2) CAAACTCTCA GAAGTTTGGC GCCTCAGAGT GGGATGAGGG 25.4 0.0254 P0.5 retina CAAACTCTCA GAACATTGCA (2) 13.7 0.0137 P2.5 retina CAAACTCTCA GAACATTGCA (2) GCCTCAGAGT 26.5 0.0265 P4.5 retina CAAAATTTCA (2) CAAACTCTCA GAACATTGCA (2) GAAGTTTGGC GCCTCAGAGT GGTGGGCCAG 55.5 0.0555 P6.5 retina CAAAATTTCA (2) CAAACTCTCA CTAGAAACTT GAACATTGCA (2) GCCTCAGAGT 76.8 0.0768 P10.5 crx- retina CAAAATTTCA (2) CAAACTCTCA CAAACTTTCA CGTGACTGGC (2) GAACATTGCA (2) TTCCCCCTCA 100.4 0.1004 P10.5 crx+ retina CAAAATTTCA (2) CAAACTCTCA CAAACTTTCA CGTGACTGGC (2) CTAGAAACTT GAACATTGCA (2) 130.6 0.1306 Adult retinal CAAAATTTCA (2) CAAACTCTCA CTAGAAACTT GAACATTGCA (2) GAAGTTTGGC GGTGGGGCAG (3) 31.7 0.0317 ONL AGAACGAGGA CAAACTCTCA GAACATTGCA (2) 9.5 0.0095