Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2930
Ppan
peter pan homolog (Drosophila)
9
235036
Human Homolog
PPAN[peter pan homolog (Drosophila)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCAGCATTA
GTGAAAAAAA
(
2
)
6.5
0.0065
Cb medulloblastoma
CAGGCCCACA
GTGAAAAAAA
(
2
)
46.2
0.0462
P8 GC+1d culture
CAGGCCCACA
GTGAAAAAAA
(
2
)
TTCAGGTTTA
10.2
0.0102
P8 GC+SHH+1d culture
CAGGCCCCAC
GTGAAAAAAA
(
2
)
11.7
0.0117
Hypothalamus
GTGAAAAAAA
(
2
)
18.1
0.0181
E12.5 retina
GTGAAAAAAA
(
2
)
11.3
0.0113
E14.5 retina
GTGAAAAAAA
(
2
)
12.8
0.0128
E16.5 retina
CAGGCCCAAC
GTGAAAAAAA
(
2
)
7.2
0.0072
E18.5 retina
GTGAAAAAAA
(
2
)
20
0.02
P0.5 retina
GTGAAAAAAA
(
2
)
TTCAGGTTTA
9.9
0.0099
P2.5 retina
GTGAAAAAAA
(
2
)
TTCAGGTTTA
12.4
0.0124
P4.5 retina
GTGAAAAAAA
(
2
)
TTCAGGTTTA
25.8
0.0258
P6.5 retina
CAGGCCCAAC
CAGGCCCCAC
CCCAGCATTA
GTGAAAAAAA
(
2
)
11.7
0.0117
P10.5 crx- retina
GTGAAAAAAA
(
2
)
3.7
0.0037
P10.5 crx+ retina
CAGGCCCAAC
CAGGCCCACA
GTGAAAAAAA
(
2
)
9.6
0.0096
Adult retinal
CAGGCCCACA
CAGGCCCCAC
GTGAAAAAAA
(
2
)
7.5
0.0075
ONL
GTGAAAAAAA
(
2
)
5.7
0.0057
