Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29644	2610007K22Rik	RIKEN cDNA 2610007K22 gene	15		67040
Gene Ontology	ATP binding | helicase activity | hydrolase activity
Human Homolog	DDX17[DEAD (Asp-Glu-Ala-Asp) box polypeptide 17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCCCGCGC GAGACAAGAG GAGGGCTGAA (3) GAGTTAACCC (3) GCAGGAGTGA (3) GCCACTGTGT (2) GTATAATGCT 16.3 0.0163 Cb medulloblastoma CTCCCCGCGC CTTGGCATTC GCAGGAGTGA (3) GGCTGTCCTG (2) 11.5 0.0115 P8 GC+1d culture CATCAAGGGT CCCCCTCCCC (2) GGCTGTCCTG (2) GTATAATGCT 17 0.017 P8 GC+SHH+1d culture CTTGGCATTC GCAGGAGTGA (3) GCCACTGTGT (2) GGCTGTCCTG (2) GTATAATGCT 17.6 0.0176 3T3 fibroblasts CTCCCCGCGC GCAGGAGTGA (3) GCCACTGTGT (2) GGCTGTCCTG (2) GTGGGTTTAA 45.5 0.0455 E15 cortex GGCTGTCCTG (2) 34.6 0.0346 P1 cortex CCCCTAACAA GGCTGTCCTG (2) 22.7 0.0227 Hypothalamus GGAAATAAAG GGCTGTCCTG (2) GTATAATGCT TACTGAGTGA 9 0.009 E12.5 retina CCCCCTCCCC (2) CTTGTGGCAT GCAGGAGTGA (3) GGCTGTCCTG (2) GTATAATGCT 17 0.017 E14.5 retina GGCTGTCCTG (2) GTGGGTTTAA 5.4 0.0054 E16.5 retina GCAGGAGTGA (3) GGCTGTCCTG (2) 3.6 0.0036 E18.5 retina CCCCTAACAA GGCTGTCCTG (2) TACTGAGTGA 9.1 0.0091 P0.5 retina CATCAAGGGT CCCCCTCCCC (2) GGCTGTCCTG (2) TACTGAGTGA 43.3 0.0433 P2.5 retina CCCCCTCCCC (2) CCCCTAACAA GAGTTAACCC (3) GCAGGAGTGA (3) GGCTGTCCTG (2) GGGCTGTCCT (2) GTATAATGCT TACTGAGTGA 33.7 0.0337 P4.5 retina CCCCCTCCCC (2) CTTGTGGCAT GAGACAAGAG GCAGGAGTGA (3) GGCTGTCCTG (2) 21.9 0.0219 P6.5 retina GGAAATAAAG GGCTGTCCTG (2) GTATAATGCT TACTGAGTGA 31.7 0.0317 P10.5 crx- retina GCAGGAGTGA (3) GGCTGTCCTG (2) 7.4 0.0074 P10.5 crx+ retina GAGGGCTGAA (3) GAGTTAACCC (3) GCAGGAGTGA (3) GCCACTGTGT (2) GGCTGTCCTG (2) GTGGGTTTAA 19.1 0.0191 Adult retinal CATCAAGGGT CCCCCTCCCC (2) CTTGGCATTC CTTGTGGCAT GGCTGTCCTG (2) GGGCTGTCCT (2) GTATAATGCT 61.3 0.0613 ONL CCCCTAACAA GCAGGAGTGA (3) GGCTGTCCTG (2) TACTGAGTGA 19.1 0.0191