Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297976	Gpc1	glypican 1	1		14733
Gene Ontology	extracellular matrix | extracellular space
Human Homolog	GPC1[glypican 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAGCCTTCT CAGAAGGCCT (2) CTGTACAGGG (2) 4.8 0.0048 Cb medulloblastoma ACCTCAAAAA AGTCCTGCCA CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA 25.4 0.0254 P8 GC+1d culture ACCTCAAAAA AGTCCTGCCA ATAGCCTTCT CTGTACAGGG (2) GGCCCAACAA 13.8 0.0138 P8 GC+SHH+1d culture ACCTCAAAAA AGTCCTGCCA ATAGCCTTCT CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA GGTGCTGCTG 29.3 0.0293 3T3 fibroblasts CAGAAGGCCT (2) CTGTACAGGG (2) 14 0.014 E15 cortex CTGTACAGGG (2) 4.9 0.0049 P1 cortex CAGAAGGCCT (2) GGCCCAACAA 13.6 0.0136 Hypothalamus ACCTCAAAAA AGTCCTGCCA GGCCCAACAA 10.8 0.0108 E12.5 retina ACCTCAAAAA CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA 11.3 0.0113 E14.5 retina ACCTCAAAAA GGCCCAACAA 7.2 0.0072 E16.5 retina CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA GGTGCTGCTG 7.2 0.0072 E18.5 retina GGCCCAACAA 3.6 0.0036 P0.5 retina AGTCCTGCCA CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA GGTGCTGCTG 17.8 0.0178 P2.5 retina ACCTCAAAAA CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA GGTGCTGCTG 17.7 0.0177 P4.5 retina ACCTCAAAAA AGTCCTGCCA GGCCCAACAA 8 0.008 P6.5 retina AGTCCTGCCA CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA 15.1 0.0151 P10.5 crx- retina AGTCCTGCCA CAGAAGGCCT (2) CTGTACAGGG (2) GGCCCAACAA 11.2 0.0112 P10.5 crx+ retina AGTCCTGCCA CAGAAGGCCT (2) GGCCCAACAA 5.7 0.0057 Adult retinal AGTCCTGCCA 3.7 0.0037 ONL GGCCCAACAA 1.9 0.0019