Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.368	Psmb4	proteasome (prosome, macropain) subunit, beta type 4	3	3 43.1 cM	19172
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | nucleus | peptidase activity | proteasome complex (sensu Eukarya) | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMB4[proteasome (prosome, macropain) subunit, beta type, 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGTGCTGT AGGCCGCTGG (3) ATCAGTGGCT CTTGGTGTAG 29.4 0.0294 Cb medulloblastoma ATCAGTGGCT CTTGGTGTAG 13.9 0.0139 P8 GC+1d culture AGGCCGCTGG (3) ATCAGTGGCT 28.5 0.0285 P8 GC+SHH+1d culture AGAGTGCTGT AGGCCGCTGG (3) ATCAGTGGCT CTGGGCTCCT (2) 32.7 0.0327 3T3 fibroblasts AGGCCGCTGG (3) ATCAGTGGCT CTGGGCTCCT (2) 17.5 0.0175 E15 cortex AGGCCGCTGG (3) ATCAGTGGCT 14.8 0.0148 Hypothalamus AGAGTGCTGT ATCAGTGGCT TGAGCGATGT 16.3 0.0163 E12.5 retina AGGCCGCTGG (3) ATCAGTGGCT CTGGGCTCCT (2) 13.2 0.0132 E14.5 retina ATCAGTGGCT 12.8 0.0128 E16.5 retina ATCAGTGGCT CTGGGCTCCT (2) TGAGCGATGT 30.8 0.0308 E18.5 retina AGGCCGCTGG (3) ATCAGTGGCT 25.4 0.0254 P0.5 retina AGAGTGCTGT AGGCCGCTGG (3) ATCAGTGGCT CTGGGCTCCT (2) TGAGCGATGT 35.4 0.0354 P2.5 retina ATCAGTGGCT CTGGGCTCCT (2) TGAGCGATGT 23 0.023 P4.5 retina AGGCCGCTGG (3) ATCAGTGGCT TGAGCGATGT 11.9 0.0119 P6.5 retina ATCAGTGGCT 15 0.015 P10.5 crx- retina ATCAGTGGCT CTTGGTGTAG 37.2 0.0372 P10.5 crx+ retina AGAGTGCTGT ATCAGTGGCT TGAGCGATGT 28.8 0.0288 Adult retinal AGGCCGCTGG (3) ATCAGTGGCT CTGGGCTCCT (2) TGAGCGATGT 11.3 0.0113 ONL ATCAGTGGCT 13.4 0.0134