| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCGAATATTC (2) GGATTTGGCC (3) TGAGGAAATG
| 24.5 | 0.0245 |
| P8 GC+1d culture | GGATTTGGCC (3) TGAGGAAATG
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | CCGAATATTC (2) GGATTTGGCC (3) TGAGGAAATG
| 9.3 | 0.0093 |
| 3T3 fibroblasts | CCGAATATTC (2) GGATTTGGCC (3)
| 7 | 0.007 |
| E15 cortex | CCGAATATTC (2) GATCCAAGGC (2) TGAGGAAATG
| 14.7 | 0.0147 |
| Hypothalamus | CCGAATATTC (2) TGAGGAAATG
| 3.6 | 0.0036 |
| E12.5 retina | GATCCAAGGC (2) GGATTTGGCC (3) GGATTTTGGC (5)
| 7.6 | 0.0076 |
| E14.5 retina | GGATTTGGCC (3) TGAGGAAATG
| 18.2 | 0.0182 |
| E16.5 retina | CCGAATATTC (2) GGATTTGGCC (3) TGAGGAAATG
| 5.4 | 0.0054 |
| E18.5 retina | GGATTTGGCC (3)
| 16.4 | 0.0164 |
| P0.5 retina | CCGAATATTC (2) GGATTTGGCC (3) GGATTTTGGC (5)
| 11.8 | 0.0118 |
| P2.5 retina | CCGAATATTC (2) GATCCAAGGC (2) GGATTTTGGC (5) TGAGGAAATG
| 7.2 | 0.0072 |
| P4.5 retina | CCGAATATTC (2) GGATTTTGGC (5)
| 4 | 0.004 |
| P6.5 retina | GATCCAAGGC (2) GGATTTGGCC (3) GGATTTTGGC (5)
| 6.7 | 0.0067 |
| P10.5 crx- retina | CCGAATATTC (2) GGATTTGGCC (3)
| 9.3 | 0.0093 |
| Adult retinal | GGATTTTGGC (5)
| 1.9 | 0.0019 |
| ONL | GGATTTGGCC (3) GGATTTTGGC (5) TGAGGAAATG
| 32.5 | 0.0325 |