Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.59812	1200009B18Rik	RIKEN cDNA 1200009B18 gene	6		67456
Mm.59812	4732416N19Rik	RIKEN cDNA 4732416N19 gene	6		320737
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTGAATAA (3) GTTAATAAAG (2) TCTACTTACT (2) TTGTGCAATA (2) 22.8 0.0228 Cb medulloblastoma ATGTGAATAA (3) GTTAATAAAG (2) 13.8 0.0138 P8 GC+1d culture AAGAGCAACA (2) ATGTGAATAA (3) GTTAATAAAG (2) TCAGGCTGTT (2) TCTACTTACT (2) TGAGACTAAG (2) 18.1 0.0181 P8 GC+SHH+1d culture ATGTGAATAA (3) GAAACTCTAG (3) TCTACTTACT (2) TTGTGCAATA (2) 22.3 0.0223 P1 cortex GAAACTCTAG (3) 4.5 0.0045 Hypothalamus AAGAGCAACA (2) ATGTGAATAA (3) GAAACTCTAG (3) GGCATCTTTA (2) TCAGGCTGTT (2) TCTACTTACT (2) TGAGACTAAG (2) 19.9 0.0199 E12.5 retina ATGTGAATAA (3) GAAACTCTAG (3) TCAGGCTGTT (2) 18.8 0.0188 E14.5 retina ATGTGAATAA (3) GAAACTCTAG (3) GTTAATAAAG (2) TCAGGCTGTT (2) 27.3 0.0273 E16.5 retina ATGTGAATAA (3) GAAACTCTAG (3) 23.5 0.0235 E18.5 retina ATGTGAATAA (3) GTTAATAAAG (2) TTGTGCAATA (2) 29.1 0.0291 P0.5 retina ATGTGAATAA (3) GAAACTCTAG (3) GTTAATAAAG (2) 11.9 0.0119 P2.5 retina ATGTGAATAA (3) CACTCTGGTG (2) GAAACTCTAG (3) GGCATCTTTA (2) GTTAATAAAG (2) TCTACTTACT (2) TTGTGCAATA (2) 26.5 0.0265 P4.5 retina ATGTGAATAA (3) GAAACTCTAG (3) GTTAATAAAG (2) TCAGGCTGTT (2) TCTACTTACT (2) TTGTGCAATA (2) 31.9 0.0319 P6.5 retina AAGAGCAACA (2) ATGTGAATAA (3) CACTCTGGTG (2) GAAACTCTAG (3) GGCATCTTTA (2) TGAGACTAAG (2) 25.1 0.0251 P10.5 crx- retina ATGTGAATAA (3) GAAACTCTAG (3) 14.9 0.0149 P10.5 crx+ retina AAGAGCAACA (2) ATGTGAATAA (3) GAAACTCTAG (3) TTGTGCAATA (2) 19.2 0.0192 Adult retinal ATGTGAATAA (3) GGCATCTTTA (2) TCTACTTACT (2) TTGTGCAATA (2) 7.6 0.0076 ONL ATGTGAATAA (3) GAAACTCTAG (3) TCTACTTACT (2) TTGTGCAATA (2) 21 0.021