Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.648	Prnp	prion protein	2	2 75.0 cM	19122
Gene Ontology	copper ion binding | copper ion homeostasis | endoplasmic reticulum | Golgi apparatus | lipid raft | lipid raft | nucleobase, nucleoside, nucleotide and nucleic acid metabolism | plasma membrane | response to oxidative stress
Human Homolog	PRNP[prion protein (p27-30) (Creutzfeld-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTTTGTTT (2) TAACTTAGCA TATTTTGTTT 13 0.013 Cb medulloblastoma CAAATTCAAA (2) CATTTTGTTT (2) TATTTTGTTT 43.9 0.0439 P8 GC+1d culture CATTTTGTTT (2) TAACTTAGCA TATTTTGTTT 25.1 0.0251 P8 GC+SHH+1d culture CAAATTCAAA (2) CATTTTGTTT (2) TATTTTGTTT 22.3 0.0223 3T3 fibroblasts TAACTTAGCA 3.5 0.0035 E15 cortex CAAATTCAAA (2) TATTTTGTTT 9.8 0.0098 P1 cortex TATTTTGTTT 9.1 0.0091 Hypothalamus CAGATTCAAA TACTTCACGT TATTTTGTTT 56.1 0.0561 E12.5 retina CATTTTGTTT (2) TATTTTGTTT 9.4 0.0094 E14.5 retina CAAATTCAAA (2) CATTTTGTTT (2) TATTTTGTTT 20.1 0.0201 E16.5 retina CAAATTCAAA (2) CATTTTGTTT (2) TATTTTGTTT 10.8 0.0108 E18.5 retina CAAATTCAAA (2) CATTTTGTTT (2) TATTTTGTTT 20 0.02 P0.5 retina CATTTTGTTT (2) TATTTTGTTT TATTTTTGTT 15.7 0.0157 P2.5 retina CAAATTCAAA (2) CAGATTCAAA CATTTTGTTT (2) TATTTTGTTT 35.3 0.0353 P4.5 retina CAGATTCAAA CATTTTGTTT (2) TATTTTGTTT TATTTTTGTT 33.8 0.0338 P6.5 retina CAAATTCAAA (2) CAGATTCAAA CATTTTGTTT (2) TATTTTGTTT 25 0.025 P10.5 crx- retina CAGATTCAAA CATTTTGTTT (2) TATTTTGTTT TATTTTTGTT 33.6 0.0336 P10.5 crx+ retina CATTTTGTTT (2) TAACTTAGCA TACTTCACGT TATTTTGTTT 25 0.025 Adult retinal CAAATTCAAA (2) CATTTTGTTT (2) TATTTTGTTT 29.6 0.0296 ONL CAGATTCAAA CATTTTGTTT (2) TATTTTGTTT TATTTTTGTT 30.6 0.0306