Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8294	Vbp1	von Hippel-Lindau binding protein 1	X	X 30.8 cM	22327
Gene Ontology	chaperone activity | cytoplasm | nucleus | prefoldin complex | protein binding | protein folding
Human Homolog	VBP1[von Hippel-Lindau binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAAAAAG (2) CAAAAGAAAA (2) 3.2 0.0032 Cb medulloblastoma AATAAAAAAG (2) CAGAAGAAAA (2) 16.1 0.0161 P8 GC+1d culture AATAAAAAAG (2) CAAAAGAAAA (2) CAGAAGAAAA (2) TTAAATAAGC 10.2 0.0102 P8 GC+SHH+1d culture AATAAAAAAG (2) CAAAAGAAAA (2) CAGAAGAAAA (2) TTAAATAAGC 14 0.014 3T3 fibroblasts CAGAAGAAAA (2) 10.5 0.0105 E15 cortex CAGAAGAAAA (2) 4.9 0.0049 P1 cortex AAAGCAGGCC CAAAAGAAAA (2) 9 0.009 Hypothalamus AATAAAAAAG (2) CAGAAGAAAA (2) TTAAATAAGC 9 0.009 E12.5 retina AATAAAAAAG (2) CAGAAGAAAA (2) 5.7 0.0057 E14.5 retina AATAAAAAAG (2) 3.6 0.0036 E16.5 retina AATAAAAAAG (2) CAGAAGAAAA (2) TTATTCCATC 12.6 0.0126 E18.5 retina CAGAAGAAAA (2) 3.6 0.0036 P0.5 retina AATAAAAAAG (2) CAGAAGAAAA (2) TTAAATAAGC 9.9 0.0099 P2.5 retina AAAGCAGGCC AATAAAAAAG (2) 12.3 0.0123 P4.5 retina AAAGCAGGCC AATAAAAAAG (2) 4 0.004 P6.5 retina CAGAAGAAAA (2) TTATTCCATC 3.4 0.0034 P10.5 crx- retina AATAAAAAAG (2) 3.7 0.0037 P10.5 crx+ retina AATAAAAAAG (2) CAGAAGAAAA (2) 5.7 0.0057 Adult retinal AATAAAAAAG (2) 3.7 0.0037 ONL AATAAAAAAG (2) 3.8 0.0038