Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.90787	Ngfrap1	nerve growth factor receptor (TNFRSF16) associated protein 1	X	X 57.5 cM	12070
Gene Ontology	cytosol | death receptor binding | induction of apoptosis | induction of apoptosis via death domain receptors | receptor activity
Human Homolog	NGFRAP1[nerve growth factor receptor (TNFRSF16) associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAGCAATG 26.1 0.0261 Cb medulloblastoma GAAAGCAATG GAGGAGATGA (2) GGAAAGGCAA TGCCAGGTGG 30 0.03 P8 GC+1d culture GAAAGCAATG GAGGAGATGA (2) GCCAATGTCC (2) GGAAAGGCAA 53.6 0.0536 P8 GC+SHH+1d culture GAAAGCAATG GGAAAGGCAA 46.8 0.0468 3T3 fibroblasts GTGCAGGTGG 3.5 0.0035 E15 cortex GAAAGCAATG GTGCAGGTGG 19.7 0.0197 P1 cortex GAAACCAATG GAAAGCAATG 9 0.009 Hypothalamus ATGAATTCTG (2) GAAAGCAATG GGAAAGGCAA GTGATCGTGG TGCCAGGTGG 57.9 0.0579 E12.5 retina GAAAGCAATG GGAAAGGCAA 67.6 0.0676 E14.5 retina ATGAATTCTG (2) GAAAGCAATG TGCCAGGTGG 63.7 0.0637 E16.5 retina ATGAATTCTG (2) GAAAGCAATG GCCAATGTCC (2) TGCCAGGTGG 61.5 0.0615 E18.5 retina ATGAATTCTG (2) GAAAGCAATG 67.3 0.0673 P0.5 retina GAAAGCAATG 21.6 0.0216 P2.5 retina GAAAGCAATG 49.3 0.0493 P4.5 retina GAAACCAATG GAAAGCAATG GTGATCGTGG 37.7 0.0377 P6.5 retina GAAAGCAATG GCCAATGTCC (2) 50.1 0.0501 P10.5 crx- retina GAAAGCAATG TGCCAGGTGG 33.5 0.0335 P10.5 crx+ retina GAAACCAATG GAAAGCAATG 46.1 0.0461 Adult retinal GAAAGCAATG GAGGAGATGA (2) GTGCAGGTGG 13.1 0.0131 ONL GAAAGCAATG 5.7 0.0057