Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.103539
5033403E17Rik
RIKEN cDNA 5033403E17 gene
1
75976
Mm.103539
9030223K07Rik
RIKEN cDNA 9030223K07 gene
1
320820
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AAAACAAAAA (
22
)
1.6
0.0016
P8 Cb GC
AAATACAAAA (
5
)
1.6
0.0016
P8 Cb GC
AATGTAGCTC
(
2
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AAAACAAAAA (
22
)
2.3
0.0023
Cb medulloblastoma
AAATACAAAA (
5
)
2.3
0.0023
Cb medulloblastoma
AATGTAGCTC
(
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAAACAAAAA (
22
)
3.4
0.0034
P8 GC+1d culture
AATGGTTTTA
(
3
)
2.3
0.0023
P8 GC+1d culture
AATGTAGCTC
(
2
)
1.1
0.0011
P8 GC+1d culture
GAAGAGATCT
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AAAACAAAAA (
22
)
2.3
0.0023
P8 GC+SHH+1d culture
AATGGTTTTA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGTATCTTG (
9
)
2.3
0.0023
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TTCCATACTC
(
3
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TTCCATACTC
(
3
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AAAACAAAAA (
22
)
1.8
0.0018
Hypothalamus
GAGTATCTTG (
9
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GAGTATCTTG (
9
)
3.8
0.0038
E12.5 retina
AAATACAAAA (
5
)
1.9
0.0019
E12.5 retina
AATGTAGCTC
(
2
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GAAGAGATCT
(
5
)
3.6
0.0036
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GAAGAGATCT
(
5
)
3.6
0.0036
E16.5 retina
GAGTATCTTG (
9
)
3.6
0.0036
E16.5 retina
AAATACAAAA (
5
)
1.8
0.0018
E16.5 retina
AATGGTTTTA
(
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GAAGAGATCT
(
5
)
5.5
0.0055
E18.5 retina
AATGTAGCTC
(
2
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AATGTAGCTC
(
2
)
3.9
0.0039
P0.5 retina
GAAGAGATCT
(
5
)
2
0.002
P0.5 retina
GAGTATCTTG (
9
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AATGGTTTTA
(
3
)
1.8
0.0018
P2.5 retina
AATGTAGCTC
(
2
)
1.8
0.0018
P2.5 retina
GAAGAGATCT
(
5
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AATGTAGCTC
(
2
)
4
0.004
P4.5 retina
GAAGAGATCT
(
5
)
4
0.004
P4.5 retina
GAGTATCTTG (
9
)
4
0.004
P4.5 retina
AAATACAAAA (
5
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GAGTATCTTG (
9
)
5
0.005
P6.5 retina
AAAACAAAAA (
22
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AAAACAAAAA (
22
)
1.9
0.0019
P10.5 crx- retina
AATGTAGCTC
(
2
)
1.9
0.0019
P10.5 crx- retina
GAGTATCTTG (
9
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TTCCATACTC
(
3
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AAAACAAAAA (
22
)
1.9
0.0019
Adult retinal
AAATACAAAA (
5
)
1.9
0.0019
Adult retinal
TTCCATACTC
(
3
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAAACAAAAA (
22
)
7.7
0.0077
ONL
AATGTAGCTC
(
2
)
1.9
0.0019
