Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.109600	Atpaf1	ATP synthase mitochondrial F1 complex assembly factor 1	4		230649
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ATPAF1[ATP synthase mitochondrial F1 complex assembly factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTGAACCA 3.3 0.0033 P8 Cb GC ATTAAAAAAA (2) 1.6 0.0016 Cb medulloblastoma ACCTGAACCA 4.6 0.0046 P8 GC+1d culture ATTAAAAAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture ATTAAAAAAA (2) 4.7 0.0047 P8 GC+SHH+1d culture CACCAGTGAG 1.2 0.0012 3T3 fibroblasts ATTAAAAAAA (2) 3.5 0.0035 E15 cortex CACCAGTGAG 4.9 0.0049 P1 cortex AGCCCTAATA 4.5 0.0045 P1 cortex CACCAGTGAG 4.5 0.0045 Hypothalamus ACCTGAACCA 5.4 0.0054 Hypothalamus ATTAAAAAAA (2) 3.6 0.0036 Hypothalamus CACCAGTGAG 1.8 0.0018 E12.5 retina ACCTGAACCA 3.8 0.0038 E12.5 retina ATTAAAAAAA (2) 1.9 0.0019 E12.5 retina CACCAGTGAG 1.9 0.0019 E14.5 retina ATTAAAAAAA (2) 10.9 0.0109 E14.5 retina ACCTGAACCA 3.6 0.0036 E16.5 retina ATTAAAAAAA (2) 3.6 0.0036 E18.5 retina ATTAAAAAAA (2) 9.1 0.0091 E18.5 retina ACCTGAACCA 1.8 0.0018 P0.5 retina ACCTGAACCA 2 0.002 P2.5 retina ACCTGAACCA 1.8 0.0018 P2.5 retina ATTAAAAAAA (2) 1.8 0.0018 P2.5 retina CACCAGTGAG 1.8 0.0018 P4.5 retina AGCCCTAATA 2 0.002 P4.5 retina ATTAAAAAAA (2) 2 0.002 P6.5 retina ACCTGAACCA 1.7 0.0017 P10.5 crx- retina CACCAGTGAG 3.7 0.0037 P10.5 crx- retina ACCTGAACCA 1.9 0.0019 P10.5 crx- retina ATTAAAAAAA (2) 1.9 0.0019 P10.5 crx+ retina ACCTGAACCA 1.9 0.0019 Adult retinal ACCTGAACCA 3.7 0.0037 ONL AGCCCTAATA 1.9 0.0019