Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.109600	Atpaf1	ATP synthase mitochondrial F1 complex assembly factor 1	4		230649
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ATPAF1[ATP synthase mitochondrial F1 complex assembly factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTGAACCA ATTAAAAAAA (2) CGCCACCACC (3) TCTCTAGCAC (2) 13 0.013 Cb medulloblastoma ACCTGAACCA CGCCACCACC (3) 11.5 0.0115 P8 GC+1d culture ATTAAAAAAA (2) CGCCACCACC (3) TCTCTAGCAC (2) 5.7 0.0057 P8 GC+SHH+1d culture ATTAAAAAAA (2) CACCAGTGAG CGCCACCACC (3) TCTCTAGCAC (2) 16.5 0.0165 3T3 fibroblasts ATTAAAAAAA (2) CGCCACCACC (3) GCTCCACCAT 14 0.014 E15 cortex CACCAGTGAG CGCCACCACC (3) 19.7 0.0197 P1 cortex AGCCCTAATA CACCAGTGAG CGCCACCACC (3) 13.5 0.0135 Hypothalamus ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG CGCCACCACC (3) 14.4 0.0144 E12.5 retina ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG CGCCACCACC (3) TCTCTAGCAC (2) 11.4 0.0114 E14.5 retina ACCTGAACCA ATTAAAAAAA (2) CGCCACCACC (3) GCTCCACCAT TCTCTAGCAC (2) 21.7 0.0217 E16.5 retina ATTAAAAAAA (2) CGCCACCACC (3) TCTCTAGCAC (2) 14.4 0.0144 E18.5 retina ACCTGAACCA ATTAAAAAAA (2) CGCCACCACC (3) TCTCTAGCAC (2) 25.4 0.0254 P0.5 retina ACCTGAACCA CGCCACCACC (3) TCTCTAGCAC (2) 11.8 0.0118 P2.5 retina ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG CGCCACCACC (3) GCTCCACCAT TCTCTAGCAC (2) 23.1 0.0231 P4.5 retina AGCCCTAATA ATTAAAAAAA (2) CGCCACCACC (3) 11.9 0.0119 P6.5 retina ACCTGAACCA CGCCACCACC (3) GCTCCACCAT 13.3 0.0133 P10.5 crx- retina ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG CGCCACCACC (3) GCTCCACCAT TCTCTAGCAC (2) 13.2 0.0132 P10.5 crx+ retina ACCTGAACCA GCTCCACCAT 3.8 0.0038 Adult retinal ACCTGAACCA CGCCACCACC (3) 13 0.013 ONL AGCCCTAATA CGCCACCACC (3) 3.8 0.0038