Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.119717	Btrc	beta-transducin repeat containing protein	19		12234
Gene Ontology	endoplasmic reticulum | ligase activity | protein modification | signal transduction | ubiquitin conjugating enzyme activity | ubiquitin-dependent protein catabolism
Human Homolog	BTRC[beta-transducin repeat containing]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGTGACCT (2) GAAGCTTGGG GTTAAAAAAA (2) 8.1 0.0081 Cb medulloblastoma GGAACAGGCC (3) GTTAAAAAAA (2) 27.7 0.0277 P8 GC+1d culture CTCTCCAGAA GAAGCTTGGG GGAACAGGCC (3) GTTAAAAAAA (2) 20.6 0.0206 P8 GC+SHH+1d culture GAAGCTTGGG GGAACAGGCC (3) GTTAAAAAAA (2) GTTTACAGAG TGGGAGAGGG 23.5 0.0235 3T3 fibroblasts GAAGCTTGGG GGAACAGGCC (3) 7 0.007 E15 cortex CTCTCCAGAA 4.9 0.0049 P1 cortex GAAGCTTGGG GTTAAAAAAA (2) GTTTACAGAG 13.5 0.0135 Hypothalamus CTCTCCAGAA GTTAAAAAAA (2) 10.9 0.0109 E12.5 retina GAAGCTTGGG GTTAAAAAAA (2) 15.1 0.0151 E14.5 retina ATGGTGACCT (2) CTCTCCAGAA GGAACAGGCC (3) GTTAAAAAAA (2) GTTTACAGAG 30.8 0.0308 E16.5 retina CTCTCCAGAA GGAACAGGCC (3) GTTAAAAAAA (2) 29 0.029 E18.5 retina CTCTCCAGAA GAAGCTTGGG GGAACAGGCC (3) GTTAAAAAAA (2) 38.2 0.0382 P0.5 retina CTCTCCAGAA GAAGCTTGGG GTTAAAAAAA (2) GTTTACAGAG TGGGAGAGGG 17.7 0.0177 P2.5 retina CTCTCCAGAA GAAGCTTGGG GGAACAGGCC (3) GTTAAAAAAA (2) 21.1 0.0211 P4.5 retina ATGGTGACCT (2) GAAGCTTGGG GGAACAGGCC (3) GTTAAAAAAA (2) GTTTACAGAG TGGGAGAGGG 23.9 0.0239 P6.5 retina GAAGCTTGGG GGAACAGGCC (3) GTTAAAAAAA (2) TGGGAGAGGG 21.7 0.0217 P10.5 crx- retina ATGGTGACCT (2) GAAGCTTGGG GGAACAGGCC (3) GTTAAAAAAA (2) 15 0.015 P10.5 crx+ retina CTCTCCAGAA GTTAAAAAAA (2) GTTTACAGAG 19.2 0.0192 Adult retinal CTCTCCAGAA GGAACAGGCC (3) 7.5 0.0075 ONL GTTAAAAAAA (2) GTTTACAGAG 5.7 0.0057