Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.119717	Btrc	beta-transducin repeat containing protein	19		12234
Gene Ontology	endoplasmic reticulum | ligase activity | protein modification | signal transduction | ubiquitin conjugating enzyme activity | ubiquitin-dependent protein catabolism
Human Homolog	BTRC[beta-transducin repeat containing]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC ATGGTGACCT (4) 1.6 0.0016 P8 Cb GC GAAGCTTGGG (3) 1.6 0.0016 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma GGAACAGGCC (6) 2.3 0.0023 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture CTCTCCAGAA (2) 2.3 0.0023 P8 GC+1d culture GAAGCTTGGG (3) 2.3 0.0023 P8 GC+1d culture GGAACAGGCC (6) 2.3 0.0023 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture GAAGCTTGGG (3) 3.5 0.0035 P8 GC+SHH+1d culture GGAACAGGCC (6) 1.2 0.0012 P8 GC+SHH+1d culture GTTTACAGAG 1.2 0.0012 P8 GC+SHH+1d culture TGGGAGAGGG (3) 1.2 0.0012 3T3 fibroblasts GAAGCTTGGG (3) 3.5 0.0035 3T3 fibroblasts GGAACAGGCC (6) 3.5 0.0035 E15 cortex CTCTCCAGAA (2) 4.9 0.0049 P1 cortex GAAGCTTGGG (3) 4.5 0.0045 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 P1 cortex GTTTACAGAG 4.5 0.0045 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus CTCTCCAGAA (2) 1.8 0.0018 E12.5 retina GAAGCTTGGG (3) 11.3 0.0113 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina CTCTCCAGAA (2) 3.6 0.0036 E14.5 retina GTTTACAGAG 3.6 0.0036 E14.5 retina ATGGTGACCT (4) 1.8 0.0018 E14.5 retina GGAACAGGCC (6) 1.8 0.0018 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina CTCTCCAGAA (2) 10.9 0.0109 E16.5 retina GGAACAGGCC (6) 1.8 0.0018 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina CTCTCCAGAA (2) 5.5 0.0055 E18.5 retina GGAACAGGCC (6) 3.6 0.0036 E18.5 retina GAAGCTTGGG (3) 1.8 0.0018 P0.5 retina GAAGCTTGGG (3) 5.9 0.0059 P0.5 retina CTCTCCAGAA (2) 3.9 0.0039 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina GTTTACAGAG 2 0.002 P0.5 retina TGGGAGAGGG (3) 2 0.002 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina CTCTCCAGAA (2) 5.3 0.0053 P2.5 retina GGAACAGGCC (6) 5.3 0.0053 P2.5 retina GAAGCTTGGG (3) 3.5 0.0035 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina GAAGCTTGGG (3) 4 0.004 P4.5 retina ATGGTGACCT (4) 2 0.002 P4.5 retina GGAACAGGCC (6) 2 0.002 P4.5 retina GTTTACAGAG 2 0.002 P4.5 retina TGGGAGAGGG (3) 2 0.002 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina GAAGCTTGGG (3) 3.3 0.0033 P6.5 retina GGAACAGGCC (6) 1.7 0.0017 P6.5 retina TGGGAGAGGG (3) 1.7 0.0017 P10.5 crx- retina GGAACAGGCC (6) 5.6 0.0056 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina ATGGTGACCT (4) 1.9 0.0019 P10.5 crx- retina GAAGCTTGGG (3) 1.9 0.0019 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina CTCTCCAGAA (2) 1.9 0.0019 P10.5 crx+ retina GTTTACAGAG 1.9 0.0019 Adult retinal GGAACAGGCC (6) 5.6 0.0056 Adult retinal CTCTCCAGAA (2) 1.9 0.0019 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL GTTTACAGAG 1.9 0.0019