Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.121265	Psma1	proteasome (prosome, macropain) subunit, alpha type 1	7	7 53.0 cM	26440
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | membrane | peptidase activity | proteasome core complex (sensu Eukarya) | transport | transporter activity | ubiquitin-dependent protein catabolism
Human Homolog	PSMA1[proteasome (prosome, macropain) subunit, alpha type, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCTGCGTGC TTGACAACCA TTTATTAAAA (2) 13 0.013 Cb medulloblastoma GTCTGCGTGC TTGAAAACCA 4.6 0.0046 P8 GC+1d culture CAGAGCAGAC GTCTGCGTGC TGTGTGGTTG TTTATTAAAA (2) 16 0.016 P8 GC+SHH+1d culture GTCTGCGTGC TTTATTAAAA (2) 9.3 0.0093 3T3 fibroblasts GTCTGCGTGC 24.5 0.0245 E15 cortex GTCTGCGTGC 19.8 0.0198 P1 cortex GTCTGCGTGC 9.1 0.0091 Hypothalamus GTCTGCGTGC TTTATTAAAA (2) 5.4 0.0054 E12.5 retina CAGAGCAGAC GTCTGCGTGC TTGAAAACCA 7.6 0.0076 E14.5 retina TTTATTAAAA (2) 7.3 0.0073 E16.5 retina GTCTGCGTGC TTTATTAAAA (2) 5.4 0.0054 E18.5 retina GTCTGCGTGC TTGAAAACCA TTGACAACCA 7.2 0.0072 P0.5 retina GTCTGCGTGC TTTATTAAAA (2) 11.8 0.0118 P2.5 retina GTCTGCGTGC 1.8 0.0018 P4.5 retina CAGAGCAGAC GTCTGCGTGC TTTATTAAAA (2) 6 0.006 P6.5 retina CAGAGCAGAC GTCTGCGTGC TTGACAACCA TTTATTAAAA (2) 13.4 0.0134 P10.5 crx- retina GTCTGCGTGC TTTATTAAAA (2) 3.8 0.0038 P10.5 crx+ retina GTCTGCGTGC TTTATTAAAA (2) 13.5 0.0135 Adult retinal GTCTGCGTGC 5.6 0.0056 ONL GTCTGCGTGC TTTATTAAAA (2) 3.8 0.0038