Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.123110	Spnb2	spectrin beta 2	11	11 13.0 cM	20742
Gene Ontology	actin binding | calmodulin binding | common-partner SMAD protein phosphorylation | cytoskeleton | membrane | nucleus | plasma membrane | protein binding | SMAD protein nuclear translocation
Human Homolog	SPTBN1[spectrin, beta, non-erythrocytic 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGTTGATTT 1.6 0.0016 Cb medulloblastoma TAGTTGATTT TGGCTTTTCT (2) 11.5 0.0115 P8 GC+1d culture TAGTTGATTT TGGCTTTTCT (2) 13.7 0.0137 P8 GC+SHH+1d culture TAGTTGATTT TCCATTAAAG TGGCTTTTCT (2) 18.8 0.0188 3T3 fibroblasts CTCTGGATGG TGGCTTTTCT (2) 70.1 0.0701 E15 cortex CTCTGGATGG TGGCTTTTCT (2) 9.8 0.0098 P1 cortex CTCTGGATGG TGGCTTTTCT (2) 9 0.009 E12.5 retina TCCATTAAAG 1.9 0.0019 E16.5 retina TGGCTTTTCT (2) 3.6 0.0036 P0.5 retina TGGCTTTTCT (2) 3.9 0.0039 P2.5 retina TAGTTGATTT TGGCTTTTCT (2) 3.6 0.0036 P4.5 retina TGGCTTTTCT (2) 5.9 0.0059 P6.5 retina TCCATTAAAG 1.7 0.0017 P10.5 crx- retina TGGCTTTTCT (2) 1.9 0.0019 P10.5 crx+ retina TAGTTGATTT TGGCTTTTCT (2) 9.6 0.0096 Adult retinal TGGCTTTTCT (2) 7.4 0.0074