Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.132579	A230003G05Rik	RIKEN cDNA A230003G05 gene	1		320240
Mm.132579	Prox1	prospero-related homeobox 1	1	1 106.3 cM	19130
Gene Ontology	cell fate determination | development | DNA binding | endothelial cell differentiation | negative regulation of cell proliferation | nucleus | regulation of transcription | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | transcription regulator activity
Human Homolog	PROX1[prospero-related homeobox 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTTTAAA (7) 11.4 0.0114 Cb medulloblastoma AACTTTTAAA (7) 23.1 0.0231 Cb medulloblastoma TAAAAATATA (7) 2.3 0.0023 Cb medulloblastoma TGGACTTTGA (6) 2.3 0.0023 P8 GC+1d culture AACTTTTAAA (7) 14.8 0.0148 P8 GC+1d culture TGGACTTTGA (6) 2.3 0.0023 P8 GC+SHH+1d culture AACTTTTAAA (7) 17.6 0.0176 E15 cortex AACTTTTAAA (7) 4.9 0.0049 P1 cortex AACTTTTAAA (7) 9.1 0.0091 P1 cortex ACAGCACAGC (6) 4.5 0.0045 Hypothalamus AACTTTTAAA (7) 16.3 0.0163 Hypothalamus GTATGAAATA (5) 3.6 0.0036 Hypothalamus ACAGCACAGC (6) 1.8 0.0018 Hypothalamus CTAATCAGAT (2) 1.8 0.0018 Hypothalamus TAAAAATATA (7) 1.8 0.0018 Hypothalamus TGGACTTTGA (6) 1.8 0.0018 E12.5 retina AACTTTTAAA (7) 20.7 0.0207 E14.5 retina AACTTTTAAA (7) 27.3 0.0273 E16.5 retina AACTTTTAAA (7) 14.5 0.0145 E16.5 retina ACAGCACAGC (6) 1.8 0.0018 E18.5 retina AACTTTTAAA (7) 27.3 0.0273 P0.5 retina AACTTTTAAA (7) 11.8 0.0118 P0.5 retina ACAGCACAGC (6) 2 0.002 P2.5 retina AACTTTTAAA (7) 26.4 0.0264 P2.5 retina CTTCCACTTA (6) 1.8 0.0018 P2.5 retina GTATGAAATA (5) 1.8 0.0018 P4.5 retina AACTTTTAAA (7) 29.7 0.0297 P6.5 retina AACTTTTAAA (7) 23.3 0.0233 P6.5 retina TAAAAATATA (7) 1.7 0.0017 P6.5 retina TGGACTTTGA (6) 1.7 0.0017 P10.5 crx- retina AACTTTTAAA (7) 7.4 0.0074 P10.5 crx- retina GTATGAAATA (5) 1.9 0.0019 P10.5 crx- retina TGGACTTTGA (6) 1.9 0.0019 P10.5 crx+ retina AACTTTTAAA (7) 11.5 0.0115 P10.5 crx+ retina TGGACTTTGA (6) 3.8 0.0038 P10.5 crx+ retina ACAGCACAGC (6) 1.9 0.0019 P10.5 crx+ retina CTTCCACTTA (6) 1.9 0.0019 Adult retinal AACTTTTAAA (7) 3.7 0.0037 Adult retinal CTAATCAGAT (2) 3.7 0.0037 Adult retinal ACAGCACAGC (6) 1.9 0.0019 ONL AACTTTTAAA (7) 9.6 0.0096 ONL CTTCCACTTA (6) 1.9 0.0019