Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.132579	A230003G05Rik	RIKEN cDNA A230003G05 gene	1		320240
Mm.132579	Prox1	prospero-related homeobox 1	1	1 106.3 cM	19130
Gene Ontology	cell fate determination | development | DNA binding | endothelial cell differentiation | negative regulation of cell proliferation | nucleus | regulation of transcription | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | transcription regulator activity
Human Homolog	PROX1[prospero-related homeobox 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTTTAAA 11.4 0.0114 Cb medulloblastoma AACTTTTAAA TAAAAATATA (2) TGGACTTTGA (4) 27.7 0.0277 P8 GC+1d culture AACTTTTAAA TGGACTTTGA (4) 17.1 0.0171 P8 GC+SHH+1d culture AACTTTTAAA 17.6 0.0176 E15 cortex AACTTTTAAA 4.9 0.0049 P1 cortex AACTTTTAAA ACAGCACAGC (4) 13.6 0.0136 Hypothalamus AACTTTTAAA ACAGCACAGC (4) CTAATCAGAT (2) GTATGAAATA TAAAAATATA (2) TGGACTTTGA (4) 27.1 0.0271 E12.5 retina AACTTTTAAA 20.7 0.0207 E14.5 retina AACTTTTAAA 27.3 0.0273 E16.5 retina AACTTTTAAA ACAGCACAGC (4) 16.3 0.0163 E18.5 retina AACTTTTAAA 27.3 0.0273 P0.5 retina AACTTTTAAA ACAGCACAGC (4) 13.8 0.0138 P2.5 retina AACTTTTAAA CTTCCACTTA (4) GTATGAAATA 30 0.03 P4.5 retina AACTTTTAAA 29.7 0.0297 P6.5 retina AACTTTTAAA TAAAAATATA (2) TGGACTTTGA (4) 26.7 0.0267 P10.5 crx- retina AACTTTTAAA GTATGAAATA TGGACTTTGA (4) 11.2 0.0112 P10.5 crx+ retina AACTTTTAAA ACAGCACAGC (4) CTTCCACTTA (4) TGGACTTTGA (4) 19.1 0.0191 Adult retinal AACTTTTAAA ACAGCACAGC (4) CTAATCAGAT (2) 9.3 0.0093 ONL AACTTTTAAA CTTCCACTTA (4) 11.5 0.0115