Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.13430
Rai12
retinoic acid induced 12
11
54351
Gene Ontology
extracellular space
Human Homolog
DERP6[S-phase 2 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGAAAAAAA (
36
)
1.6
0.0016
Cb medulloblastoma
GGGAAAAAAA (
36
)
92.5
0.0925
Cb medulloblastoma
CTCTGAGGCA (
6
)
4.6
0.0046
P8 GC+1d culture
AAGGGCTTCC
(
2
)
4.6
0.0046
P8 GC+1d culture
GGGAAAAAAA (
36
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGGGCTTCC
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
GAAAGAAGCT (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGAAAAAAA (
36
)
1.2
0.0012
3T3 fibroblasts
AAGGGCTTCC
(
2
)
3.5
0.0035
E15 cortex
AAGGGCTTCC
(
2
)
14.8
0.0148
P1 cortex
AAGGGCTTCC
(
2
)
4.5
0.0045
P1 cortex
CTCTGAGGCA (
6
)
4.5
0.0045
P1 cortex
GGGAAAAAAA (
36
)
4.5
0.0045
Hypothalamus
GGGAAAAAAA (
36
)
41.7
0.0417
Hypothalamus
TCGGGGGTGT
1.8
0.0018
E12.5 retina
GAAAGAAGCT (
8
)
1.9
0.0019
E14.5 retina
GGGAAAAAAA (
36
)
1.8
0.0018
E16.5 retina
GAAAGAAGCT (
8
)
5.4
0.0054
E16.5 retina
GGGAAAAAAA (
36
)
3.6
0.0036
E16.5 retina
CTCTGAGGCA (
6
)
1.8
0.0018
E16.5 retina
TCGGGGGTGT
1.8
0.0018
E18.5 retina
GAAAGAAGCT (
8
)
3.6
0.0036
E18.5 retina
CTCTGAGGCA (
6
)
1.8
0.0018
E18.5 retina
GGGAAAAAAA (
36
)
1.8
0.0018
P0.5 retina
CTCTGAGGCA (
6
)
3.9
0.0039
P0.5 retina
GGGAAAAAAA (
36
)
3.9
0.0039
P0.5 retina
AAGGGCTTCC
(
2
)
2
0.002
P2.5 retina
GGGAAAAAAA (
36
)
7
0.007
P2.5 retina
CTCTGAGGCA (
6
)
1.8
0.0018
P2.5 retina
GAAAGAAGCT (
8
)
1.8
0.0018
P4.5 retina
GGGAAAAAAA (
36
)
9.9
0.0099
P4.5 retina
AAGGGCTTCC
(
2
)
2
0.002
P6.5 retina
GGGAAAAAAA (
36
)
20
0.02
P6.5 retina
CTCTGAGGCA (
6
)
1.7
0.0017
P10.5 crx- retina
GGGAAAAAAA (
36
)
11.1
0.0111
P10.5 crx- retina
CTCTGAGGCA (
6
)
7.4
0.0074
P10.5 crx+ retina
GGGAAAAAAA (
36
)
23.1
0.0231
P10.5 crx+ retina
CTCTGAGGCA (
6
)
1.9
0.0019
Adult retinal
GGGAAAAAAA (
36
)
35.2
0.0352
Adult retinal
AAGGGCTTCC
(
2
)
5.6
0.0056
Adult retinal
CTCTGAGGCA (
6
)
5.6
0.0056
Adult retinal
TCGGGGGTGT
1.9
0.0019
ONL
GGGAAAAAAA (
36
)
30.6
0.0306
ONL
AAGGGCTTCC
(
2
)
5.7
0.0057
