Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.13430
Rai12
retinoic acid induced 12
11
54351
Gene Ontology
extracellular space
Human Homolog
DERP6[S-phase 2 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGAAAAAAA (
5
)
1.6
0.0016
Cb medulloblastoma
CTCTGAGGCA
GGGAAAAAAA (
5
)
97.1
0.0971
P8 GC+1d culture
AAGGGCTTCC
GGGAAAAAAA (
5
)
5.7
0.0057
P8 GC+SHH+1d culture
AAGGGCTTCC
GAAAGAAGCT (
2
)
GGGAAAAAAA (
5
)
8.2
0.0082
3T3 fibroblasts
AAGGGCTTCC
3.5
0.0035
E15 cortex
AAGGGCTTCC
14.8
0.0148
P1 cortex
AAGGGCTTCC
CTCTGAGGCA
GGGAAAAAAA (
5
)
13.5
0.0135
Hypothalamus
GGGAAAAAAA (
5
)
TCGGGGGTGT
43.5
0.0435
E12.5 retina
GAAAGAAGCT (
2
)
1.9
0.0019
E14.5 retina
GGGAAAAAAA (
5
)
1.8
0.0018
E16.5 retina
CTCTGAGGCA
GAAAGAAGCT (
2
)
GGGAAAAAAA (
5
)
TCGGGGGTGT
12.6
0.0126
E18.5 retina
CTCTGAGGCA
GAAAGAAGCT (
2
)
GGGAAAAAAA (
5
)
7.2
0.0072
P0.5 retina
AAGGGCTTCC
CTCTGAGGCA
GGGAAAAAAA (
5
)
9.8
0.0098
P2.5 retina
CTCTGAGGCA
GAAAGAAGCT (
2
)
GGGAAAAAAA (
5
)
10.6
0.0106
P4.5 retina
AAGGGCTTCC
GGGAAAAAAA (
5
)
11.9
0.0119
P6.5 retina
CTCTGAGGCA
GGGAAAAAAA (
5
)
21.7
0.0217
P10.5 crx- retina
CTCTGAGGCA
GGGAAAAAAA (
5
)
18.5
0.0185
P10.5 crx+ retina
CTCTGAGGCA
GGGAAAAAAA (
5
)
25
0.025
Adult retinal
AAGGGCTTCC
CTCTGAGGCA
GGGAAAAAAA (
5
)
TCGGGGGTGT
48.3
0.0483
ONL
AAGGGCTTCC
GGGAAAAAAA (
5
)
36.3
0.0363
