Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.140761	Dnajc5	DnaJ (Hsp40) homolog, subfamily C, member 5	2	2 106.0 cM	13002
Gene Ontology	membrane | protein folding
Human Homolog	DNAJC5[DnaJ (Hsp40) homolog, subfamily C, member 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGCTCATC CCTCTGTTTG (2) GAAGTTTTGA TGTCCCAGCA TTCTTGGACT 16.3 0.0163 Cb medulloblastoma CCTCTGTTTG (2) GGTTCACAGC TTCTTGGACT 16.2 0.0162 P8 GC+1d culture ACAGGCCTGC CAAGCTCATC CCTCTGTTTG (2) GTGAGCTGTC 15.9 0.0159 P8 GC+SHH+1d culture CCTCTGTTTG (2) GGTTCACAGC GTGAGCTGTC TGTCCCAGCA 12.9 0.0129 3T3 fibroblasts CAAGCTCATC CCTCTGTTTG (2) 10.5 0.0105 E15 cortex CAAGCTCATC CCTCTGTTTG (2) GTGAGCTGTC 29.6 0.0296 P1 cortex CAAGCTCATC CCTCTGTTTG (2) 31.8 0.0318 Hypothalamus CAAGCTCATC CCTCTGTTTG (2) GGTTCACAGC 12.7 0.0127 E12.5 retina CAAGCTCATC CCTCTGTTTG (2) GTGAGCTGTC TTCTTGGACT 17 0.017 E14.5 retina ACAGGCCTGC CCTCTGTTTG (2) GAAGTTTTGA GTGAGCTGTC 18.2 0.0182 E16.5 retina CCTCTGTTTG (2) GAAGTTTTGA TTCTTGGACT 14.5 0.0145 E18.5 retina CAAGCTCATC CCTCTGTTTG (2) GAAGTTTTGA 18.2 0.0182 P0.5 retina ACAGGCCTGC CCTCTGTTTG (2) GTGAGCTGTC 17.7 0.0177 P2.5 retina CCTCTGTTTG (2) GTGAGCTGTC 14.1 0.0141 P4.5 retina CAAGCTCATC CCTCTGTTTG (2) GGTTCACAGC 35.7 0.0357 P6.5 retina CAAGCTCATC CCTCTGTTTG (2) GGTTCACAGC GTGAGCTGTC 38.4 0.0384 P10.5 crx- retina CCTCTGTTTG (2) GTGAGCTGTC TTCTTGGACT 37.2 0.0372 P10.5 crx+ retina ACAGGCCTGC CCTCTGTTTG (2) GGTTCACAGC GTGAGCTGTC 30.6 0.0306 Adult retinal CAAGCTCATC CCTCTGTTTG (2) TGTCCCAGCA TTCTTGGACT 37.1 0.0371 ONL ACAGGCCTGC CCTCTGTTTG (2) GAAGTTTTGA GGTTCACAGC GTGAGCTGTC 21 0.021