| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGACAAAGG (4) GCTTACTTAA (4) GGAGAAAAAA (6) GTATTTACAG (4)
| 8.1 | 0.0081 |
| Cb medulloblastoma | GAGACAAGGC (4) GGAGAAAAAA (6)
| 11.5 | 0.0115 |
| P8 GC+1d culture | AGGTCTTGGG (4) CTGGGATCTA (4) GCTTACTTAA (4)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | AGGTCTTGGG (4) CTGGGATCTA (4) GAGACAAAGG (4) GCTTACTTAA (4) GGAGAAAAAA (6) GTATTTACAG (4)
| 10.5 | 0.0105 |
| E15 cortex | AGGTCTTGGG (4)
| 4.9 | 0.0049 |
| Hypothalamus | GAGACAAAGG (4) GAGACAAGGC (4)
| 9 | 0.009 |
| E12.5 retina | GTATTTACAG (4)
| 3.8 | 0.0038 |
| E14.5 retina | CTGGGATCTA (4) GTAAATGAGA (4)
| 12.8 | 0.0128 |
| E16.5 retina | CTGGGATCTA (4) GCTTACTTAA (4)
| 7.2 | 0.0072 |
| E18.5 retina | CTGGGATCTA (4) GCTTACTTAA (4) GTATTTACAG (4)
| 7.2 | 0.0072 |
| P0.5 retina | CTGGGATCTA (4) GCTTACTTAA (4) GTATTTACAG (4)
| 9.9 | 0.0099 |
| P2.5 retina | AGGTCTTGGG (4) GAGACAAAGG (4) GGAGAAAAAA (6) GTATTTACAG (4)
| 8.9 | 0.0089 |
| P4.5 retina | AGGTCTTGGG (4)
| 2 | 0.002 |
| P6.5 retina | AGGTCTTGGG (4) GAGACAAAGG (4) GCTTACTTAA (4) GGAGAAAAAA (6) GTATTTACAG (4)
| 11.7 | 0.0117 |
| P10.5 crx- retina | GAGACAAGGC (4) GCTTACTTAA (4)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GAGACAAGGC (4) GTATTTACAG (4)
| 5.7 | 0.0057 |
| Adult retinal | GAGACAAAGG (4) GAGACAAGGC (4) GGAGAAAAAA (6) GTATTTACAG (4)
| 7.6 | 0.0076 |
| ONL | GAGACAAAGG (4) GTATTTACAG (4)
| 3.8 | 0.0038 |