Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.14910 Cspg6chondroitin sulfate proteoglycan 6 19    13006 
 Gene Ontology ATP binding | cell cycle | chromosome segregation | DNA repair | meiosis | mitosis | nucleus | protein binding
 Human Homolog CSPG6[chondroitin sulfate proteoglycan 6 (bamacan)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAAAA (658)203.90.2039
P8 Cb GCTAAAAAAAAA (196)47.30.0473
P8 Cb GCGTTAACTGAA (2)6.50.0065
P8 Cb GCAAGAGAAAGA (17)4.90.0049
Cb medulloblastomaAAAAAAAAAA (658)797.80.7978
Cb medulloblastomaTAAAAAAAAA (196)106.40.1064
Cb medulloblastomaAAGAGAAAGA (17)4.60.0046
Cb medulloblastomaTGCCATAAAA (5)4.60.0046
P8 GC+1d cultureAAAAAAAAAA (658)204.30.2043
P8 GC+1d cultureTAAAAAAAAA (196)66.20.0662
P8 GC+1d cultureAAGAGAAAGA (17)9.10.0091
P8 GC+1d cultureGAATTGATGA (4)80.008
P8 GC+1d cultureGTTAACTGAA (2)5.70.0057
P8 GC+1d cultureTGAACAAAAA (3)1.10.0011
P8 GC+SHH+1d cultureAAAAAAAAAA (658)278.70.2787
P8 GC+SHH+1d cultureTAAAAAAAAA (196)93.70.0937
P8 GC+SHH+1d cultureAAGAGAAAGA (17)70.007
P8 GC+SHH+1d cultureGTTAACTGAA (2)5.90.0059
P8 GC+SHH+1d cultureTGCCATAAAA (5)1.20.0012
3T3 fibroblastsAAAAAAAAAA (658)280.028
3T3 fibroblastsGTCATAGCTG (590)10.50.0105
3T3 fibroblastsGTTAACTGAA (2)70.007
3T3 fibroblastsTAAAAAAAAA (196)70.007
3T3 fibroblastsGCTCCGCGCC (5)3.50.0035
E15 cortexAAAAAAAAAA (658)212.80.2128
E15 cortexTAAAAAAAAA (196)9.90.0099
E15 cortexGTCATAGCTG (590)4.90.0049
E15 cortexGTTAACTGAA (2)4.90.0049
P1 cortexAAAAAAAAAA (658)245.40.2454
P1 cortexTAAAAAAAAA (196)500.05
P1 cortexGTTAACTGAA (2)13.60.0136
P1 cortexAAGAGAAAGA (17)4.50.0045
P1 cortexCAACAAAGCC (2)4.50.0045
P1 cortexGAATTGATGA (4)4.50.0045
P1 cortexTGAACAAAAA (3)4.50.0045
HypothalamusAAAAAAAAAA (658)123.20.1232
HypothalamusTAAAAAAAAA (196)32.60.0326
HypothalamusAAGAGAAAGA (17)14.50.0145
HypothalamusGAATTGATGA (4)14.50.0145
HypothalamusTGCCATAAAA (5)1.80.0018
E12.5 retinaAAAAAAAAAA (658)138.90.1389
E12.5 retinaTAAAAAAAAA (196)24.40.0244
E12.5 retinaAAGAGAAAGA (17)7.50.0075
E12.5 retinaAGCTTCTCTT (3)1.90.0019
E12.5 retinaCTGTTGAAGA (3)1.90.0019
E12.5 retinaGCTCCGCGCC (5)1.90.0019
E12.5 retinaGTTAACTGAA (2)1.90.0019
E14.5 retinaAAAAAAAAAA (658)94.70.0947
E14.5 retinaTAAAAAAAAA (196)41.90.0419
E14.5 retinaAAGAGAAAGA (17)14.60.0146
E14.5 retinaGTTAACTGAA (2)3.60.0036
E16.5 retinaAAAAAAAAAA (658)43.50.0435
E16.5 retinaTAAAAAAAAA (196)23.50.0235
E16.5 retinaGTTAACTGAA (2)3.60.0036
E16.5 retinaAAGAGAAAGA (17)1.80.0018
E18.5 retinaAAAAAAAAAA (658)374.70.3747
E18.5 retinaTAAAAAAAAA (196)107.30.1073
E18.5 retinaAAGAGAAAGA (17)16.40.0164
E18.5 retinaGTTAACTGAA (2)1.80.0018
P0.5 retinaAAAAAAAAAA (658)117.80.1178
P0.5 retinaTAAAAAAAAA (196)37.30.0373
P0.5 retinaGTTAACTGAA (2)7.90.0079
P0.5 retinaGTCATAGCTG (590)3.90.0039
P0.5 retinaGCCCAGTTTA20.002
P2.5 retinaAAAAAAAAAA (658)329.10.3291
P2.5 retinaTAAAAAAAAA (196)72.20.0722
P2.5 retinaAAGAGAAAGA (17)8.80.0088
P2.5 retinaGAATTGATGA (4)3.50.0035
P2.5 retinaCAACAAAGCC (2)1.80.0018
P2.5 retinaGTCATAGCTG (590)1.80.0018
P4.5 retinaAAAAAAAAAA (658)283.30.2833
P4.5 retinaTAAAAAAAAA (196)122.80.1228
P4.5 retinaAAGAGAAAGA (17)5.90.0059
P4.5 retinaGTTAACTGAA (2)40.004
P4.5 retinaAGCTTCTCTT (3)20.002
P4.5 retinaGTCATAGCTG (590)20.002
P6.5 retinaAAAAAAAAAA (658)266.80.2668
P6.5 retinaTAAAAAAAAA (196)63.40.0634
P6.5 retinaGAATTGATGA (4)6.70.0067
P6.5 retinaAAGAGAAAGA (17)50.005
P6.5 retinaGTCATAGCTG (590)3.30.0033
P6.5 retinaGTTAACTGAA (2)3.30.0033
P6.5 retinaTGAACAAAAA (3)1.70.0017
P6.5 retinaTGCCATAAAA (5)1.70.0017
P10.5 crx- retinaAAAAAAAAAA (658)44.60.0446
P10.5 crx- retinaAAGAGAAAGA (17)9.30.0093
P10.5 crx- retinaGAATTGATGA (4)9.30.0093
P10.5 crx- retinaTAAAAAAAAA (196)9.30.0093
P10.5 crx- retinaAGCTTCTCTT (3)5.60.0056
P10.5 crx- retinaGTTAACTGAA (2)5.60.0056
P10.5 crx- retinaCAACAAAGCC (2)1.90.0019
P10.5 crx- retinaGCCCAGTTTA1.90.0019
P10.5 crx+ retinaAAAAAAAAAA (658)96.10.0961
P10.5 crx+ retinaTAAAAAAAAA (196)250.025
P10.5 crx+ retinaAAGAGAAAGA (17)13.50.0135
P10.5 crx+ retinaGAATTGATGA (4)3.80.0038
P10.5 crx+ retinaGCCCAGTTTA1.90.0019
P10.5 crx+ retinaTGAACAAAAA (3)1.90.0019
Adult retinalAAAAAAAAAA (658)57.40.0574
Adult retinalTAAAAAAAAA (196)18.50.0185
Adult retinalGAATTGATGA (4)16.70.0167
Adult retinalAAGAGAAAGA (17)5.60.0056
Adult retinalCTGTTGAAGA (3)1.90.0019
Adult retinalGCCCAGTTTA1.90.0019
Adult retinalGTCATAGCTG (590)1.90.0019
ONLAAAAAAAAAA (658)103.40.1034
ONLTAAAAAAAAA (196)28.70.0287
ONLAAGAGAAAGA (17)13.40.0134
ONLGTCATAGCTG (590)5.70.0057
ONLCTGTTGAAGA (3)1.90.0019
ONLGTTAACTGAA (2)1.90.0019