Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.157360	2610005L07Rik	RIKEN cDNA 2610005L07 gene	4		381598
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 221 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACATTTAAAA (10) 24.5 0.0245 P8 Cb GC GTGGCTCTCA (6) 8.2 0.0082 P8 Cb GC AGAAATAAAT (4) 6.5 0.0065 P8 Cb GC CTGGCCATCT (2) 4.9 0.0049 P8 Cb GC ATGTCTCATA 3.3 0.0033 P8 Cb GC CTTTACCTAG 3.3 0.0033 P8 Cb GC GCTCCAGTTA 1.6 0.0016 P8 Cb GC GGACTTCTTT (2) 1.6 0.0016 P8 Cb GC GGAGGGGCTG 1.6 0.0016 P8 Cb GC GGTGGACTCT (5) 1.6 0.0016 P8 Cb GC GTGGCTCCCA (14) 1.6 0.0016 P8 Cb GC TGCCACCACA (19) 1.6 0.0016 P8 Cb GC TTGAGAATGA 1.6 0.0016 Cb medulloblastoma AGAAATAAAT (4) 9.2 0.0092 Cb medulloblastoma GGAGGGGCTG 9.2 0.0092 Cb medulloblastoma ACATTTAAAA (10) 6.9 0.0069 Cb medulloblastoma CTGGCCATCT (2) 6.9 0.0069 Cb medulloblastoma GTGGCTCTCA (6) 4.6 0.0046 Cb medulloblastoma AGAAGTAAGG (2) 2.3 0.0023 Cb medulloblastoma CTTTACCTAG 2.3 0.0023 Cb medulloblastoma GAAAGAGGGA (5) 2.3 0.0023 Cb medulloblastoma GCTCCAGTTA 2.3 0.0023 Cb medulloblastoma GGTGGACTCT (5) 2.3 0.0023 Cb medulloblastoma GTGGCTCCCA (14) 2.3 0.0023 Cb medulloblastoma TGAGAATGAT (4) 2.3 0.0023 P8 GC+1d culture AGAAATAAAT (4) 16 0.016 P8 GC+1d culture GGAGGGGCTG 13.7 0.0137 P8 GC+1d culture CTGGCCATCT (2) 11.4 0.0114 P8 GC+1d culture ACATTTAAAA (10) 10.3 0.0103 P8 GC+1d culture GTGGCTCTCA (6) 6.8 0.0068 P8 GC+1d culture GAAAGAGGGA (5) 3.4 0.0034 P8 GC+1d culture GTGGCTCCCA (14) 3.4 0.0034 P8 GC+1d culture TTGAGAATGA 2.3 0.0023 P8 GC+1d culture AAATTTAAAA (7) 1.1 0.0011 P8 GC+1d culture CCTCCGTCCT 1.1 0.0011 P8 GC+1d culture CTTTACCTAG 1.1 0.0011 P8 GC+1d culture GCTCCAGTTA 1.1 0.0011 P8 GC+1d culture GGTGGACTCT (5) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTCTCA (6) 28.1 0.0281 P8 GC+SHH+1d culture AGAAATAAAT (4) 17.6 0.0176 P8 GC+SHH+1d culture GGAGGGGCTG 11.7 0.0117 P8 GC+SHH+1d culture ACATTTAAAA (10) 10.5 0.0105 P8 GC+SHH+1d culture CTGGCCATCT (2) 5.9 0.0059 P8 GC+SHH+1d culture AGACAGCTCC (3) 3.5 0.0035 P8 GC+SHH+1d culture TTGAGAATGA 3.5 0.0035 P8 GC+SHH+1d culture GTGGCTCCCA (14) 2.3 0.0023 P8 GC+SHH+1d culture ATGTCTCATA 1.2 0.0012 P8 GC+SHH+1d culture CAGGAGCAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTTACCTAG 1.2 0.0012 P8 GC+SHH+1d culture GAAAGAGGGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GGCTTCGAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TAAACGGCAT 1.2 0.0012 P8 GC+SHH+1d culture TGAGAATGAT (4) 1.2 0.0012 P8 GC+SHH+1d culture TGCCACCACA (19) 1.2 0.0012 3T3 fibroblasts CTGGCCATCT (2) 28 0.028 3T3 fibroblasts GGACTTCTTT (2) 3.5 0.0035 3T3 fibroblasts GTGGCTCTCA (6) 3.5 0.0035 3T3 fibroblasts TGCCACCACA (19) 3.5 0.0035 3T3 fibroblasts TTGAGAATGA 3.5 0.0035 E15 cortex GGAGGGGCTG 19.8 0.0198 E15 cortex CTGGCCATCT (2) 9.9 0.0099 E15 cortex ACATTTAAAA (10) 4.9 0.0049 E15 cortex GAAAGAGGGA (5) 4.9 0.0049 E15 cortex GTGGCTCCCA (14) 4.9 0.0049 E15 cortex GTGGCTCTCA (6) 4.9 0.0049 P1 cortex GTGGCTCCCA (14) 18.2 0.0182 P1 cortex GGAGGGGCTG 13.6 0.0136 P1 cortex GTGGCTCTCA (6) 9.1 0.0091 P1 cortex ATAGGTGTCC 4.5 0.0045 P1 cortex CTGGCCATCT (2) 4.5 0.0045 Hypothalamus GTGGCTCTCA (6) 12.7 0.0127 Hypothalamus GTGGCTCCCA (14) 10.9 0.0109 Hypothalamus GAAAGAGGGA (5) 7.2 0.0072 Hypothalamus TGCCACCACA (19) 5.4 0.0054 Hypothalamus ACATTTAAAA (10) 3.6 0.0036 Hypothalamus AGAAAGGGCA (5) 3.6 0.0036 Hypothalamus CTGGCCATCT (2) 3.6 0.0036 Hypothalamus AAGTCTTTCT (5) 1.8 0.0018 Hypothalamus GGCTTCGAAT (2) 1.8 0.0018 Hypothalamus TTCCCGCCTT (3) 1.8 0.0018 Hypothalamus TTGAGAATGA 1.8 0.0018 E12.5 retina GTGGCTCCCA (14) 16.9 0.0169 E12.5 retina GTGGCTCTCA (6) 16.9 0.0169 E12.5 retina GAAAGAGGGA (5) 7.5 0.0075 E12.5 retina ACATTTAAAA (10) 5.6 0.0056 E12.5 retina AAGTCTTTCT (5) 1.9 0.0019 E12.5 retina AGAAATAAAT (4) 1.9 0.0019 E12.5 retina CCTCCGTCCT 1.9 0.0019 E12.5 retina CTGGCCATCT (2) 1.9 0.0019 E12.5 retina GCTCCAGTTA 1.9 0.0019 E12.5 retina GGAGGGGCTG 1.9 0.0019 E12.5 retina TGCCACCACA (19) 1.9 0.0019 E14.5 retina AGAAATAAAT (4) 16.4 0.0164 E14.5 retina GTGGCTCCCA (14) 16.4 0.0164 E14.5 retina GTGGCTCTCA (6) 10.9 0.0109 E14.5 retina TGCCACCACA (19) 9.1 0.0091 E14.5 retina ACATTTAAAA (10) 5.5 0.0055 E14.5 retina CTTTACCTAG 3.6 0.0036 E14.5 retina AATGCAAATG (3) 1.8 0.0018 E14.5 retina CTGGCCATCT (2) 1.8 0.0018 E14.5 retina GAAAGAGGGA (5) 1.8 0.0018 E14.5 retina GGAGGGGCTG 1.8 0.0018 E14.5 retina GGTGGACTCT (5) 1.8 0.0018 E14.5 retina TTCCCGCCTT (3) 1.8 0.0018 E16.5 retina GTGGCTCTCA (6) 12.7 0.0127 E16.5 retina AGAAATAAAT (4) 9.1 0.0091 E16.5 retina CTGGCCATCT (2) 9.1 0.0091 E16.5 retina GTGGCTCCCA (14) 9.1 0.0091 E16.5 retina GAAAGAGGGA (5) 5.4 0.0054 E16.5 retina AATGCAAATG (3) 3.6 0.0036 E16.5 retina ACATTTAAAA (10) 3.6 0.0036 E16.5 retina TTGAGAATGA 3.6 0.0036 E16.5 retina ATAGGTGTCC 1.8 0.0018 E16.5 retina TGAGAATGAT (4) 1.8 0.0018 E18.5 retina AGAAATAAAT (4) 23.6 0.0236 E18.5 retina GTGGCTCCCA (14) 20 0.02 E18.5 retina ACATTTAAAA (10) 9.1 0.0091 E18.5 retina GGAGGGGCTG 9.1 0.0091 E18.5 retina GTGGCTCTCA (6) 9.1 0.0091 E18.5 retina GAAAGAGGGA (5) 7.3 0.0073 E18.5 retina CTGGCCATCT (2) 3.6 0.0036 E18.5 retina AAGTCTTTCT (5) 1.8 0.0018 E18.5 retina AGAAGTAAGG (2) 1.8 0.0018 P0.5 retina CTGGCCATCT (2) 13.7 0.0137 P0.5 retina TGCCACCACA (19) 13.7 0.0137 P0.5 retina GTGGCTCCCA (14) 9.8 0.0098 P0.5 retina GGAGGGGCTG 7.9 0.0079 P0.5 retina GTGGCTCTCA (6) 7.9 0.0079 P0.5 retina CTTTACCTAG 5.9 0.0059 P0.5 retina AGAAAGGGCA (5) 2 0.002 P0.5 retina AGAAATAAAT (4) 2 0.002 P0.5 retina ATGTCTCATA 2 0.002 P0.5 retina GAAAGAGGGA (5) 2 0.002 P0.5 retina GGTGGACTCT (5) 2 0.002 P0.5 retina TTGAGAATGA 2 0.002 P2.5 retina GTGGCTCCCA (14) 26.4 0.0264 P2.5 retina CTGGCCATCT (2) 15.8 0.0158 P2.5 retina GTGGCTCTCA (6) 12.3 0.0123 P2.5 retina AGAAATAAAT (4) 10.6 0.0106 P2.5 retina GAAAGAGGGA (5) 7 0.007 P2.5 retina GGAGGGGCTG 3.5 0.0035 P2.5 retina TTGAGAATGA 3.5 0.0035 P2.5 retina ACATTTAAAA (10) 1.8 0.0018 P2.5 retina ATGTCTCATA 1.8 0.0018 P2.5 retina CTTTACCTAG 1.8 0.0018 P2.5 retina GCTCCAGTTA 1.8 0.0018 P2.5 retina TGAGAATGAT (4) 1.8 0.0018 P2.5 retina TGCCACCACA (19) 1.8 0.0018 P4.5 retina AGAAATAAAT (4) 15.9 0.0159 P4.5 retina GTGGCTCCCA (14) 9.9 0.0099 P4.5 retina GTGGCTCTCA (6) 9.9 0.0099 P4.5 retina GAAAGAGGGA (5) 7.9 0.0079 P4.5 retina CTGGCCATCT (2) 5.9 0.0059 P4.5 retina ACATTTAAAA (10) 4 0.004 P4.5 retina GGAGGGGCTG 4 0.004 P4.5 retina AGAAGTAAGG (2) 2 0.002 P4.5 retina CTTCCTGCCT (5) 2 0.002 P4.5 retina GCTCCAGTTA 2 0.002 P4.5 retina TTGAGAATGA 2 0.002 P6.5 retina GTGGCTCCCA (14) 15 0.015 P6.5 retina CTGGCCATCT (2) 13.3 0.0133 P6.5 retina AGAAATAAAT (4) 10 0.01 P6.5 retina TGCCACCACA (19) 8.3 0.0083 P6.5 retina GTGGCTCTCA (6) 6.7 0.0067 P6.5 retina TTCCCGCCTT (3) 5 0.005 P6.5 retina GAAAGAGGGA (5) 3.3 0.0033 P6.5 retina GGAGGGGCTG 3.3 0.0033 P6.5 retina ACATTTAAAA (10) 1.7 0.0017 P6.5 retina TAAACGGCAT 1.7 0.0017 P6.5 retina TTGAGAATGA 1.7 0.0017 P10.5 crx- retina GTGGCTCCCA (14) 14.9 0.0149 P10.5 crx- retina CTGGCCATCT (2) 11.1 0.0111 P10.5 crx- retina GTGGCTCTCA (6) 5.6 0.0056 P10.5 crx- retina ACATTTAAAA (10) 3.7 0.0037 P10.5 crx- retina AGAAATAAAT (4) 3.7 0.0037 P10.5 crx- retina CTTTACCTAG 3.7 0.0037 P10.5 crx- retina TAAACGGCAT 3.7 0.0037 P10.5 crx- retina TGCCACCACA (19) 3.7 0.0037 P10.5 crx- retina AAATTTAAAA (7) 1.9 0.0019 P10.5 crx- retina AGAAAGGGCA (5) 1.9 0.0019 P10.5 crx- retina AGAAGTAAGG (2) 1.9 0.0019 P10.5 crx- retina ATAGGTGTCC 1.9 0.0019 P10.5 crx- retina CCTCCGTCCT 1.9 0.0019 P10.5 crx- retina GAAAGAGGGA (5) 1.9 0.0019 P10.5 crx- retina GGCTTCGAAT (2) 1.9 0.0019 P10.5 crx+ retina CTGGCCATCT (2) 30.8 0.0308 P10.5 crx+ retina GTGGCTCCCA (14) 11.5 0.0115 P10.5 crx+ retina AGAAATAAAT (4) 7.7 0.0077 P10.5 crx+ retina GTGGCTCTCA (6) 7.7 0.0077 P10.5 crx+ retina GAAAGAGGGA (5) 5.8 0.0058 P10.5 crx+ retina TTGAGAATGA 5.8 0.0058 P10.5 crx+ retina ACATTTAAAA (10) 3.8 0.0038 P10.5 crx+ retina TTCCCGCCTT (3) 3.8 0.0038 P10.5 crx+ retina CCTCCGTCCT 1.9 0.0019 P10.5 crx+ retina GACAGAGAGG 1.9 0.0019 P10.5 crx+ retina GGCTTCGAAT (2) 1.9 0.0019 P10.5 crx+ retina TGCCACCACA (19) 1.9 0.0019 Adult retinal GTGGCTCCCA (14) 14.8 0.0148 Adult retinal CTGGCCATCT (2) 11.1 0.0111 Adult retinal GTGGCTCTCA (6) 7.4 0.0074 Adult retinal TGCCACCACA (19) 5.6 0.0056 Adult retinal CTTCCTGCCT (5) 3.7 0.0037 Adult retinal AGAAATAAAT (4) 1.9 0.0019 Adult retinal CAGGAGCAAT (2) 1.9 0.0019 Adult retinal CTTTACCTAG 1.9 0.0019 Adult retinal GAAAGAGGGA (5) 1.9 0.0019 Adult retinal GGACTTCTTT (2) 1.9 0.0019 ONL GTGGCTCCCA (14) 28.7 0.0287 ONL AGAAATAAAT (4) 13.4 0.0134 ONL AAATTTAAAA (7) 5.7 0.0057 ONL ACATTTAAAA (10) 3.8 0.0038 ONL CTGGCCATCT (2) 3.8 0.0038 ONL GAAAGAGGGA (5) 3.8 0.0038 ONL GACAGAGAGG 3.8 0.0038 ONL AAGTCTTTCT (5) 1.9 0.0019 ONL AGAAGTAAGG (2) 1.9 0.0019 ONL CTTCCTGCCT (5) 1.9 0.0019 ONL CTTTACCTAG 1.9 0.0019 ONL GGCTTCGAAT (2) 1.9 0.0019 ONL TGAGAATGAT (4) 1.9 0.0019 ONL TGCCACCACA (19) 1.9 0.0019