Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.157648
5730403B10Rik
RIKEN cDNA 5730403B10 gene
16
16 2.7 cM
66626
Mm.157648
C77872
expressed sequence C77872
16
98011
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTGTTTGCAT
(
4
)
4.9
0.0049
P8 Cb GC
CTAAATACCA
(
2
)
1.6
0.0016
P8 Cb GC
GCCTCCTATC
(
2
)
1.6
0.0016
Cb medulloblastoma
GCCTCCTATC
(
2
)
11.6
0.0116
Cb medulloblastoma
TTGTTTGCAT
(
4
)
6.9
0.0069
P8 GC+1d culture
GCCTCCTATC
(
2
)
5.7
0.0057
P8 GC+1d culture
TTGTTTGCAT
(
4
)
2.3
0.0023
P8 GC+1d culture
CTAAATACCA
(
2
)
1.1
0.0011
P8 GC+1d culture
TCCTGTCTAA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCTCCTATC
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
TCCTGTCTAA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGTTTGCAT
(
4
)
1.2
0.0012
3T3 fibroblasts
GCCTCCTATC
(
2
)
3.5
0.0035
E15 cortex
GCCTCCTATC
(
2
)
9.9
0.0099
Hypothalamus
GCCTCCTATC
(
2
)
7.2
0.0072
Hypothalamus
TTGTTTGCAT
(
4
)
3.6
0.0036
E12.5 retina
TTGTTTGCAT
(
4
)
5.6
0.0056
E14.5 retina
TCCTGTCTAA
(
2
)
3.6
0.0036
E14.5 retina
TTGTTTGCAT
(
4
)
1.8
0.0018
E16.5 retina
TTGTTTGCAT
(
4
)
5.4
0.0054
E16.5 retina
TCCTGTCTAA
(
2
)
1.8
0.0018
E18.5 retina
GCCTCCTATC
(
2
)
1.8
0.0018
E18.5 retina
TTGTTTGCAT
(
4
)
1.8
0.0018
P0.5 retina
GCCTCCTATC
(
2
)
3.9
0.0039
P0.5 retina
CTAAATACCA
(
2
)
2
0.002
P2.5 retina
GCCTCCTATC
(
2
)
5.3
0.0053
P2.5 retina
TTGTTTGCAT
(
4
)
3.5
0.0035
P4.5 retina
TCCTGTCTAA
(
2
)
4
0.004
P4.5 retina
GCCTCCTATC
(
2
)
2
0.002
P4.5 retina
TTGTTTGCAT
(
4
)
2
0.002
P6.5 retina
GCCTCCTATC
(
2
)
8.3
0.0083
P6.5 retina
CTAAATACCA
(
2
)
5
0.005
P6.5 retina
TCCTGTCTAA
(
2
)
3.3
0.0033
P10.5 crx- retina
TTGTTTGCAT
(
4
)
5.6
0.0056
P10.5 crx- retina
GCCTCCTATC
(
2
)
3.7
0.0037
P10.5 crx+ retina
GCCTCCTATC
(
2
)
7.7
0.0077
P10.5 crx+ retina
TTGTTTGCAT
(
4
)
5.8
0.0058
Adult retinal
GCCTCCTATC
(
2
)
13
0.013
Adult retinal
TCCTGTCTAA
(
2
)
3.7
0.0037
Adult retinal
TTGTTTGCAT
(
4
)
1.9
0.0019
ONL
GCCTCCTATC
(
2
)
3.8
0.0038
