Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.158264
Pfdn5
prefoldin 5
15
15 61.7 cM
56612
Mm.158264
1700010A06Rik
RIKEN cDNA 1700010A06 gene
15
69335
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAATGATGA
(
2
)
27.7
0.0277
P8 Cb GC
GCCTCCTGGG
(
4
)
4.9
0.0049
P8 Cb GC
AAGCAGGCTG
(
2
)
1.6
0.0016
Cb medulloblastoma
GAAATGATGA
(
2
)
11.6
0.0116
Cb medulloblastoma
CTCCACATCG
(
2
)
2.3
0.0023
Cb medulloblastoma
TGCTTATTGA
(
2
)
2.3
0.0023
P8 GC+1d culture
GAAATGATGA
(
2
)
18.3
0.0183
P8 GC+1d culture
GCCTCCTGGG
(
4
)
9.1
0.0091
P8 GC+SHH+1d culture
GCCTCCTGGG
(
4
)
8.2
0.0082
P8 GC+SHH+1d culture
GAAATGATGA
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
CTCCACATCG
(
2
)
1.2
0.0012
3T3 fibroblasts
GAAATGATGA
(
2
)
7
0.007
3T3 fibroblasts
GCCTCCTGGG
(
4
)
3.5
0.0035
E15 cortex
GAAATGATGA
(
2
)
4.9
0.0049
E15 cortex
GCCTCCTGGG
(
4
)
4.9
0.0049
P1 cortex
GAAATGATGA
(
2
)
18.2
0.0182
Hypothalamus
GAAATGATGA
(
2
)
18.1
0.0181
Hypothalamus
CTCCACATCG
(
2
)
3.6
0.0036
E12.5 retina
GAAATGATGA
(
2
)
22.5
0.0225
E12.5 retina
GCCTCCTGGG
(
4
)
11.3
0.0113
E14.5 retina
GCCTCCTGGG
(
4
)
10.9
0.0109
E14.5 retina
CTCCACATCG
(
2
)
1.8
0.0018
E16.5 retina
GAAATGATGA
(
2
)
9.1
0.0091
E16.5 retina
GCCTCCTGGG
(
4
)
7.2
0.0072
E16.5 retina
CTCCACATCG
(
2
)
1.8
0.0018
E16.5 retina
TGCTTATTGA
(
2
)
1.8
0.0018
E18.5 retina
GAAATGATGA
(
2
)
7.3
0.0073
P0.5 retina
GAAATGATGA
(
2
)
23.6
0.0236
P0.5 retina
GCCTCCTGGG
(
4
)
3.9
0.0039
P0.5 retina
CTCCACATCG
(
2
)
2
0.002
P2.5 retina
GAAATGATGA
(
2
)
8.8
0.0088
P2.5 retina
GCCTCCTGGG
(
4
)
1.8
0.0018
P4.5 retina
GAAATGATGA
(
2
)
13.9
0.0139
P6.5 retina
GAAATGATGA
(
2
)
13.3
0.0133
P6.5 retina
GCCTCCTGGG
(
4
)
5
0.005
P10.5 crx- retina
GAAATGATGA
(
2
)
48.3
0.0483
P10.5 crx- retina
GCCTCCTGGG
(
4
)
11.1
0.0111
P10.5 crx- retina
TGCTTATTGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAAATGATGA
(
2
)
13.5
0.0135
P10.5 crx+ retina
GCCTCCTGGG
(
4
)
5.8
0.0058
P10.5 crx+ retina
CTCCACATCG
(
2
)
1.9
0.0019
Adult retinal
GAAATGATGA
(
2
)
20.4
0.0204
Adult retinal
GCCTCCTGGG
(
4
)
5.6
0.0056
Adult retinal
TGCTTATTGA
(
2
)
1.9
0.0019
ONL
GAAATGATGA
(
2
)
28.7
0.0287
ONL
AAGCAGGCTG
(
2
)
3.8
0.0038
ONL
GCCTCCTGGG
(
4
)
1.9
0.0019
