Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1605	2310035P21Rik	RIKEN cDNA 2310035P21 gene	19		75683
Mm.1605	Pdcd4	programmed cell death 4	19	19 20.0 cM	18569
Gene Ontology	isomerase activity
Human Homolog	PDCD4[programmed cell death 4 (neoplastic transformation inhibitor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTAACTCGT (2) GCACTTAGAA (2) TGAAACACTG (2) TTGGCTGCTG (3) 29.3 0.0293 Cb medulloblastoma TGAAACACTG (2) TTGGCTGCTG (3) 4.6 0.0046 P8 GC+1d culture GCACTTAGAA (2) TGAAACACTA (2) TGAAACACTG (2) TTGGCTGCTG (3) 13.6 0.0136 P8 GC+SHH+1d culture ACTAACTCGT (2) GCACTTAGAA (2) TGAAACACTG (2) 23.4 0.0234 3T3 fibroblasts TGAAACACTG (2) TTGGCTGCTG (3) 7 0.007 E15 cortex GCACTTAGAA (2) TGAAACACTG (2) 9.8 0.0098 P1 cortex GCACTTAGAA (2) 4.5 0.0045 Hypothalamus TGAAACACTG (2) TTGGCTGCTG (3) 7.2 0.0072 E12.5 retina ACTAACTCGT (2) GCACTTAGAA (2) TGAAACACTG (2) 11.3 0.0113 E14.5 retina ACTAACTCGT (2) GCACTTAGAA (2) GGGAAGAAAG (2) TGAAACACTG (2) 12.7 0.0127 E16.5 retina GCACTTAGAA (2) TGAAACACTG (2) TTGGCTGCTG (3) 10.8 0.0108 E18.5 retina ACTAACTCGT (2) TGAAACACTG (2) 23.7 0.0237 P0.5 retina ACTAACTCGT (2) GCACTTAGAA (2) GGGAAGAAAG (2) TGAAACACTG (2) 15.8 0.0158 P2.5 retina ACTAACTCGT (2) GCACTTAGAA (2) TGAAACACTG (2) 28.2 0.0282 P4.5 retina ACTAACTCGT (2) GCACTTAGAA (2) TGAAACACTG (2) 45.5 0.0455 P6.5 retina ACTAACTCGT (2) GCACTTAGAA (2) TGAAACACTA (2) TGAAACACTG (2) 30 0.03 P10.5 crx- retina GCACTTAGAA (2) TGAAACACTG (2) 16.7 0.0167 P10.5 crx+ retina ACTAACTCGT (2) GCACTTAGAA (2) GGGAAGAAAG (2) TGAAACACTG (2) 23 0.023 Adult retinal TGAAACACTG (2) 13 0.013 ONL GCACTTAGAA (2) TGAAACACTG (2) 5.7 0.0057