Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.16716	Lamp1	lysosomal membrane glycoprotein 1	8	8 1.0 cM	16783
Gene Ontology	extracellular space | integral to membrane | late endosome | lysosome | membrane | multivesicular body | sarcolemma
Human Homolog	LAMP1[lysosomal-associated membrane protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC TTGATCCCCA 3.3 0.0033 P8 Cb GC CCTACTCATT 1.6 0.0016 P8 Cb GC CTGGGAGGGG (4) 1.6 0.0016 P8 Cb GC GCAGGGCTGG (6) 1.6 0.0016 P8 Cb GC GCGGCCCCCG (3) 1.6 0.0016 P8 Cb GC GCGGGCCCCG (9) 1.6 0.0016 Cb medulloblastoma CTGGGAGGGG (4) 9.2 0.0092 Cb medulloblastoma GCAGGGCTGG (6) 4.6 0.0046 Cb medulloblastoma GCGCCTCAGC 4.6 0.0046 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTGATCCCCA 16 0.016 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTGGGAGGGG (4) 2.3 0.0023 P8 GC+1d culture GCGCCTCAGC 2.3 0.0023 P8 GC+SHH+1d culture TTGATCCCCA 11.7 0.0117 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CCCTTTCTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGGGAGGGG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCGGGCCCCG (9) 1.2 0.0012 3T3 fibroblasts GCGCCTCAGC 3.5 0.0035 3T3 fibroblasts TTGATCCCCA 3.5 0.0035 E15 cortex CTGGGAGGGG (4) 4.9 0.0049 E15 cortex TTGATCCCCA 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex CTGGGAGGGG (4) 22.7 0.0227 P1 cortex CCTACTCATT 9.1 0.0091 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTGATCCCCA 9.1 0.0091 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CTGGGAGGGG (4) 1.8 0.0018 Hypothalamus GCAGGGCTGG (6) 1.8 0.0018 Hypothalamus GCGGCCCCCG (3) 1.8 0.0018 Hypothalamus GCGGGCCCCG (9) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina CCCTCTACCC (3) 3.8 0.0038 E12.5 retina TTGATCCCCA 3.8 0.0038 E12.5 retina CTGGGAGGGG (4) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CTGGGAGGGG (4) 1.8 0.0018 E14.5 retina GCGCCTCAGC 1.8 0.0018 E14.5 retina GCGGGCCCCG (9) 1.8 0.0018 E16.5 retina CTGGGAGGGG (4) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CCCTCTACCC (3) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TTGATCCCCA 3.6 0.0036 E18.5 retina CCCTTTCTTT (2) 1.8 0.0018 E18.5 retina CCTACTCATT 1.8 0.0018 E18.5 retina GCGGGCCCCG (9) 1.8 0.0018 P0.5 retina TTGATCCCCA 11.8 0.0118 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CTGGGAGGGG (4) 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TTGATCCCCA 5.3 0.0053 P2.5 retina CTGGGAGGGG (4) 1.8 0.0018 P2.5 retina GCGGGCCCCG (9) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TTGATCCCCA 7.9 0.0079 P4.5 retina ACAGACTCCT (2) 2 0.002 P4.5 retina CCCTTTCTTT (2) 2 0.002 P4.5 retina CTGGGAGGGG (4) 2 0.002 P6.5 retina TTGATCCCCA 10 0.01 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CTGGGAGGGG (4) 6.7 0.0067 P6.5 retina GCGGCCCCCG (3) 1.7 0.0017 P6.5 retina GCGGGCCCCG (9) 1.7 0.0017 P10.5 crx- retina ACAGACTCCT (2) 1.9 0.0019 P10.5 crx- retina CCCTTTCTTT (2) 1.9 0.0019 P10.5 crx- retina TTGATCCCCA 1.9 0.0019 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CCCTCTACCC (3) 1.9 0.0019 P10.5 crx+ retina GCGGGCCCCG (9) 1.9 0.0019 Adult retinal CTGGGAGGGG (4) 11.1 0.0111 Adult retinal TTGATCCCCA 7.4 0.0074 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CCCTCTACCC (3) 1.9 0.0019 Adult retinal GCGCCTCAGC 1.9 0.0019 ONL GCAGGGCTGG (6) 3.8 0.0038 ONL TTGATCCCCA 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL ACAGACTCCT (2) 1.9 0.0019