Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.16716	Lamp1	lysosomal membrane glycoprotein 1	8	8 1.0 cM	16783
Gene Ontology	extracellular space | integral to membrane | late endosome | lysosome | membrane | multivesicular body | sarcolemma
Human Homolog	LAMP1[lysosomal-associated membrane protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTACTCATT CTGGGAGGGG GCAGGGCTGG (3) GCGGCCCCCG GCGGGCCCCG TTGATCCCCA TTTTTTTTTT (2) 16.2 0.0162 Cb medulloblastoma CTGGGAGGGG GCAGGGCTGG (3) GCGCCTCAGC TTTTTTTTTT (2) 20.7 0.0207 P8 GC+1d culture CTGGGAGGGG GCGCCTCAGC TTGATCCCCA TTTTTTTTTT (2) 34.3 0.0343 P8 GC+SHH+1d culture CCCTTTCTTT CTGGGAGGGG GCGGGCCCCG TTGATCCCCA TTTTTTTTTT (2) 21.2 0.0212 3T3 fibroblasts GCGCCTCAGC TTGATCCCCA 7 0.007 E15 cortex CTGGGAGGGG TTGATCCCCA TTTTTTTTTT (2) 14.7 0.0147 P1 cortex CCTACTCATT CTGGGAGGGG TTTTTTTTTT (2) 36.3 0.0363 Hypothalamus CTGGGAGGGG GCAGGGCTGG (3) GCGGCCCCCG GCGGGCCCCG TTGATCCCCA TTTTTTTTTT (2) 23.5 0.0235 E12.5 retina CCCTCTACCC (2) CTGGGAGGGG TTGATCCCCA TTTTTTTTTT (2) 17 0.017 E14.5 retina CTGGGAGGGG GCGCCTCAGC GCGGGCCCCG TTTTTTTTTT (2) 29.1 0.0291 E16.5 retina CCCTCTACCC (2) CTGGGAGGGG TTTTTTTTTT (2) 12.6 0.0126 E18.5 retina CCCTTTCTTT CCTACTCATT GCGGGCCCCG TTGATCCCCA TTTTTTTTTT (2) 19.9 0.0199 P0.5 retina CTGGGAGGGG TTGATCCCCA TTTTTTTTTT (2) 23.6 0.0236 P2.5 retina CTGGGAGGGG GCGGGCCCCG TTGATCCCCA TTTTTTTTTT (2) 15.9 0.0159 P4.5 retina ACAGACTCCT CCCTTTCTTT CTGGGAGGGG TTGATCCCCA TTTTTTTTTT (2) 23.8 0.0238 P6.5 retina CTGGGAGGGG GCGGCCCCCG GCGGGCCCCG TTGATCCCCA TTTTTTTTTT (2) 28.4 0.0284 P10.5 crx- retina ACAGACTCCT CCCTTTCTTT TTGATCCCCA 5.7 0.0057 P10.5 crx+ retina CCCTCTACCC (2) GCGGGCCCCG TTTTTTTTTT (2) 7.6 0.0076 Adult retinal CCCTCTACCC (2) CTGGGAGGGG GCGCCTCAGC TTGATCCCCA TTTTTTTTTT (2) 29.7 0.0297 ONL ACAGACTCCT GCAGGGCTGG (3) TTGATCCCCA TTTTTTTTTT (2) 13.3 0.0133