Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.171389	Ppp6c	protein phosphatase 6, catalytic subunit	2		67857
Gene Ontology	CTD phosphatase activity | G1/S transition of mitotic cell cycle | hydrolase activity | manganese ion binding | myosin phosphatase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein phosphatase type 1 activity | protein phosphatase type 2A activity | protein phosphatase type 2C activity | protein serine/threonine phosphatase activity | regulation of cell shape
Human Homolog	PPP6C[protein phosphatase 6, catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAGAGTGTA (3) 1.6 0.0016 P8 Cb GC ATCAAGAAAA (7) 1.6 0.0016 P8 Cb GC CAGCAATGTG (4) 1.6 0.0016 Cb medulloblastoma TAGCTCTTGC 2.3 0.0023 P8 GC+1d culture TAGCTCTTGC 5.7 0.0057 P8 GC+1d culture CAGCAATGTG (4) 1.1 0.0011 P8 GC+SHH+1d culture AATTGTATTT (4) 2.3 0.0023 P8 GC+SHH+1d culture ACCTTGAAAC (6) 2.3 0.0023 P8 GC+SHH+1d culture ATCAAGAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture CAGCAATGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture TAGCTCTTGC 1.2 0.0012 3T3 fibroblasts ACAGAGTGTA (3) 3.5 0.0035 3T3 fibroblasts ACCTTGAAAC (6) 3.5 0.0035 3T3 fibroblasts TAGCTCTTGC 3.5 0.0035 E15 cortex GAAAAAGTAG (5) 9.9 0.0099 E15 cortex TAGCTCTTGC 4.9 0.0049 P1 cortex ACAGAGTGTA (3) 4.5 0.0045 P1 cortex GAAAAAGTAG (5) 4.5 0.0045 Hypothalamus ACCTTGAAAC (6) 3.6 0.0036 Hypothalamus ATCAAGAAAA (7) 3.6 0.0036 Hypothalamus CAGCAATGTG (4) 1.8 0.0018 E12.5 retina ACCTTGAAAC (6) 3.8 0.0038 E12.5 retina CAGCAATGTG (4) 1.9 0.0019 E12.5 retina TAGCTCTTGC 1.9 0.0019 E14.5 retina TGCCAATAAT (4) 3.6 0.0036 E14.5 retina ACCTTGAAAC (6) 1.8 0.0018 E14.5 retina ATCAAGAAAA (7) 1.8 0.0018 E16.5 retina ACCTTGAAAC (6) 10.9 0.0109 E16.5 retina ATCAAGAAAA (7) 1.8 0.0018 E18.5 retina ACCTTGAAAC (6) 1.8 0.0018 E18.5 retina ATCAAGAAAA (7) 1.8 0.0018 P0.5 retina GAAAAAGTAG (5) 3.9 0.0039 P0.5 retina ACCTTGAAAC (6) 2 0.002 P0.5 retina TAGCTCTTGC 2 0.002 P2.5 retina TAGCTCTTGC 5.3 0.0053 P2.5 retina TGCCAATAAT (4) 1.8 0.0018 P4.5 retina GAAAAAGTAG (5) 4 0.004 P6.5 retina ACAGAGTGTA (3) 1.7 0.0017 P10.5 crx- retina TAGCTCTTGC 1.9 0.0019 P10.5 crx+ retina TAGCTCTTGC 3.8 0.0038 P10.5 crx+ retina ACAGAGTGTA (3) 1.9 0.0019 P10.5 crx+ retina ATCAAGAAAA (7) 1.9 0.0019 ONL TAGCTCTTGC 1.9 0.0019