Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.171389	Ppp6c	protein phosphatase 6, catalytic subunit	2		67857
Gene Ontology	CTD phosphatase activity | G1/S transition of mitotic cell cycle | hydrolase activity | manganese ion binding | myosin phosphatase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein phosphatase type 1 activity | protein phosphatase type 2A activity | protein phosphatase type 2C activity | protein serine/threonine phosphatase activity | regulation of cell shape
Human Homolog	PPP6C[protein phosphatase 6, catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAGAGTGTA ATCAAGAAAA (3) CAGCAATGTG (3) 4.8 0.0048 Cb medulloblastoma TAGCTCTTGC 2.3 0.0023 P8 GC+1d culture CAGCAATGTG (3) TAGCTCTTGC 6.8 0.0068 P8 GC+SHH+1d culture AATTGTATTT ACCTTGAAAC (2) ATCAAGAAAA (3) CAGCAATGTG (3) TAGCTCTTGC 8.2 0.0082 3T3 fibroblasts ACAGAGTGTA ACCTTGAAAC (2) TAGCTCTTGC 10.5 0.0105 E15 cortex GAAAAAGTAG TAGCTCTTGC 14.8 0.0148 P1 cortex ACAGAGTGTA GAAAAAGTAG 9 0.009 Hypothalamus ACCTTGAAAC (2) ATCAAGAAAA (3) CAGCAATGTG (3) 9 0.009 E12.5 retina ACCTTGAAAC (2) CAGCAATGTG (3) TAGCTCTTGC 7.6 0.0076 E14.5 retina ACCTTGAAAC (2) ATCAAGAAAA (3) TGCCAATAAT (2) 7.2 0.0072 E16.5 retina ACCTTGAAAC (2) ATCAAGAAAA (3) 12.7 0.0127 E18.5 retina ACCTTGAAAC (2) ATCAAGAAAA (3) 3.6 0.0036 P0.5 retina ACCTTGAAAC (2) GAAAAAGTAG TAGCTCTTGC 7.9 0.0079 P2.5 retina TAGCTCTTGC TGCCAATAAT (2) 7.1 0.0071 P4.5 retina GAAAAAGTAG 4 0.004 P6.5 retina ACAGAGTGTA 1.7 0.0017 P10.5 crx- retina TAGCTCTTGC 1.9 0.0019 P10.5 crx+ retina ACAGAGTGTA ATCAAGAAAA (3) TAGCTCTTGC 7.6 0.0076 ONL TAGCTCTTGC 1.9 0.0019