Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17185	Lgmn	legumain	12		19141
Gene Ontology	apical part of cell | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | late endosome | legumain activity | lysosome | negative regulation of body size | proteolysis and peptidolysis
Human Homolog	LGMN[legumain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTCATTTA (3) 1.6 0.0016 Cb medulloblastoma AAAGTGATGC GACAAAGTGT (2) 4.6 0.0046 P8 GC+1d culture TCTTCATTTA (3) 2.3 0.0023 P8 GC+SHH+1d culture GACAAAGTGT (2) TCTTCATTTA (3) 7.1 0.0071 3T3 fibroblasts GACAAAGTGT (2) TCTTCATTTA (3) 7 0.007 P1 cortex TCTTCATTTA (3) 27.3 0.0273 Hypothalamus AAAGTGATGC 1.8 0.0018 E12.5 retina GACAAAGTGT (2) TCTTCATTTA (3) 3.8 0.0038 E14.5 retina TCTTCATTTA (3) 3.6 0.0036 P0.5 retina GACAAAGTGT (2) GCACAACTCA TCTTCATTTA (3) 11.9 0.0119 P2.5 retina TCTTCATTTA (3) 5.3 0.0053 P4.5 retina GACAAAGTGT (2) GCACAACTCA TCTTCATTTA (3) 9.9 0.0099 P6.5 retina GACAAAGTGT (2) 3.3 0.0033 P10.5 crx- retina AAAGTGATGC GACAAAGTGT (2) 13 0.013 P10.5 crx+ retina GACAAAGTGT (2) GCACAACTCA TCTTCATTTA (3) 7.6 0.0076 Adult retinal GACAAAGTGT (2) 5.6 0.0056 ONL GACAAAGTGT (2) GCACAACTCA TCTTCATTTA (3) 5.7 0.0057