Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.172897
Map3k12
mitogen activated protein kinase kinase kinase 12
15
26404
Mm.172897
C81508
expressed sequence C81508
15
97977
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 194 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAATGTAAG
(
6
)
73.4
0.0734
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
TGGATGCTGG (
15
)
13.1
0.0131
P8 Cb GC
AGCCAAACAA
(
5
)
4.9
0.0049
P8 Cb GC
CAGGCAAAAA (
5
)
4.9
0.0049
P8 Cb GC
CAGGCCCAAA
(
3
)
4.9
0.0049
P8 Cb GC
AAAGACACTC
(
3
)
1.6
0.0016
P8 Cb GC
CCTTTAATTC (
36
)
1.6
0.0016
P8 Cb GC
GAAACACTAT
(
4
)
1.6
0.0016
P8 Cb GC
GTGCTGGGAT (
6
)
1.6
0.0016
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
GAAATGTAAG
(
6
)
46.2
0.0462
Cb medulloblastoma
CAGGCCCAAA
(
3
)
18.5
0.0185
Cb medulloblastoma
GAAACACTAT
(
4
)
6.9
0.0069
Cb medulloblastoma
CAGGCAAAAA (
5
)
4.6
0.0046
Cb medulloblastoma
CCTTTAATTC (
36
)
4.6
0.0046
Cb medulloblastoma
TGGATGCTGG (
15
)
4.6
0.0046
Cb medulloblastoma
ACCTTCTACT
(
3
)
2.3
0.0023
Cb medulloblastoma
AGCCAAACAA
(
5
)
2.3
0.0023
Cb medulloblastoma
ATTTTTTAAT (
4
)
2.3
0.0023
Cb medulloblastoma
CTGTTAGTCG
(
4
)
2.3
0.0023
P8 GC+1d culture
GAAATGTAAG
(
6
)
42.2
0.0422
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
TGGATGCTGG (
15
)
8
0.008
P8 GC+1d culture
CAGGCCCAAA
(
3
)
6.8
0.0068
P8 GC+1d culture
GAAACACTAT
(
4
)
4.6
0.0046
P8 GC+1d culture
CAGGCAAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
ACCTTCTACT
(
3
)
1.1
0.0011
P8 GC+1d culture
AGCCAAACAA
(
5
)
1.1
0.0011
P8 GC+1d culture
ATTTTTTAAT (
4
)
1.1
0.0011
P8 GC+1d culture
CCACCTGTCT (
5
)
1.1
0.0011
P8 GC+1d culture
GGTGGTGAAC
(
3
)
1.1
0.0011
P8 GC+1d culture
TGATGGCTCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAATGTAAG
(
6
)
73.8
0.0738
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
CAGGCCCAAA
(
3
)
7
0.007
P8 GC+SHH+1d culture
CCTTTAATTC (
36
)
7
0.007
P8 GC+SHH+1d culture
GAAACACTAT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGCTGGGAT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGATGCTGG (
15
)
2.3
0.0023
P8 GC+SHH+1d culture
AGCCAAACAA
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGGCAAAAA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
CCACCTGTCT (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGGGGGAGG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGAAAATGT (
3
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATTC (
36
)
7
0.007
3T3 fibroblasts
GAAATGTAAG
(
6
)
7
0.007
3T3 fibroblasts
AGCCAAACAA
(
5
)
3.5
0.0035
3T3 fibroblasts
CAGGCCCAAA
(
3
)
3.5
0.0035
3T3 fibroblasts
TGGATGCTGG (
15
)
3.5
0.0035
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
CAGGCCCAAA
(
3
)
19.8
0.0198
E15 cortex
TGGATGCTGG (
15
)
14.8
0.0148
E15 cortex
GAAATGTAAG
(
6
)
9.9
0.0099
P1 cortex
GAAATGTAAG
(
6
)
27.3
0.0273
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
CAGGCAAAAA (
5
)
13.6
0.0136
P1 cortex
CCTTTAATTC (
36
)
13.6
0.0136
P1 cortex
GAAACACTAT
(
4
)
4.5
0.0045
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
GAAATGTAAG
(
6
)
25.4
0.0254
Hypothalamus
CAGGCAAAAA (
5
)
10.9
0.0109
Hypothalamus
CAGGCCCAAA
(
3
)
10.9
0.0109
Hypothalamus
TGGATGCTGG (
15
)
5.4
0.0054
Hypothalamus
ACAAACAAAA
(
3
)
3.6
0.0036
Hypothalamus
AGTGGATGAT
(
3
)
3.6
0.0036
Hypothalamus
GAAACACTAT
(
4
)
3.6
0.0036
Hypothalamus
AAAGACACTC
(
3
)
1.8
0.0018
Hypothalamus
AGCCAAACAA
(
5
)
1.8
0.0018
Hypothalamus
TGCACTAAAT
(
2
)
1.8
0.0018
E12.5 retina
GAAATGTAAG
(
6
)
97.6
0.0976
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
AGCCAAACAA
(
5
)
7.5
0.0075
E12.5 retina
TGGATGCTGG (
15
)
5.6
0.0056
E12.5 retina
CCTTTAATTC (
36
)
3.8
0.0038
E12.5 retina
AGTGGATGAT
(
3
)
1.9
0.0019
E12.5 retina
CAGGCCCAAA
(
3
)
1.9
0.0019
E12.5 retina
CCACCTGTCT (
5
)
1.9
0.0019
E12.5 retina
GAGGGGGAGG
(
4
)
1.9
0.0019
E12.5 retina
GTGCTGGGAT (
6
)
1.9
0.0019
E14.5 retina
GAAATGTAAG
(
6
)
98.4
0.0984
E14.5 retina
TGGATGCTGG (
15
)
18.2
0.0182
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
CCTTTAATTC (
36
)
7.3
0.0073
E14.5 retina
CTGTTAGTCG
(
4
)
5.5
0.0055
E14.5 retina
GAAACACTAT
(
4
)
5.5
0.0055
E14.5 retina
AGCCAAACAA
(
5
)
3.6
0.0036
E14.5 retina
CAGGCAAAAA (
5
)
3.6
0.0036
E14.5 retina
GGTGGTGAAC
(
3
)
3.6
0.0036
E14.5 retina
AGTGGATGAT
(
3
)
1.8
0.0018
E14.5 retina
CAGGCCCAAA
(
3
)
1.8
0.0018
E14.5 retina
CCACCTGTCT (
5
)
1.8
0.0018
E16.5 retina
GAAATGTAAG
(
6
)
115.9
0.1159
E16.5 retina
TGGATGCTGG (
15
)
30.8
0.0308
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
CAGGCAAAAA (
5
)
5.4
0.0054
E16.5 retina
CAGGCCCAAA
(
3
)
5.4
0.0054
E16.5 retina
CCTTTAATTC (
36
)
3.6
0.0036
E16.5 retina
GAAACACTAT
(
4
)
3.6
0.0036
E16.5 retina
GGTGGTGAAC
(
3
)
3.6
0.0036
E16.5 retina
TGATGGCTCA
(
3
)
3.6
0.0036
E16.5 retina
AAAGACACTC
(
3
)
1.8
0.0018
E16.5 retina
CAGGCCCAAC (
4
)
1.8
0.0018
E16.5 retina
CTGTTAGTCG
(
4
)
1.8
0.0018
E16.5 retina
GAGGGGGAGG
(
4
)
1.8
0.0018
E18.5 retina
GAAATGTAAG
(
6
)
63.7
0.0637
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
AGCCAAACAA
(
5
)
9.1
0.0091
E18.5 retina
CAGGCCCAAA
(
3
)
9.1
0.0091
E18.5 retina
CAGGCAAAAA (
5
)
7.3
0.0073
E18.5 retina
AGTGGATGAT
(
3
)
3.6
0.0036
E18.5 retina
AAAGACACTC
(
3
)
1.8
0.0018
E18.5 retina
ACAAACAAAA
(
3
)
1.8
0.0018
E18.5 retina
CCTTTAATTC (
36
)
1.8
0.0018
E18.5 retina
GTGCTGGGAT (
6
)
1.8
0.0018
E18.5 retina
TGGATGCTGG (
15
)
1.8
0.0018
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
GAAATGTAAG
(
6
)
55
0.055
P0.5 retina
TGGATGCTGG (
15
)
7.9
0.0079
P0.5 retina
CCTTTAATTC (
36
)
5.9
0.0059
P0.5 retina
CTGTTAGTCG
(
4
)
3.9
0.0039
P0.5 retina
CAGGCCCAAA
(
3
)
2
0.002
P0.5 retina
GTGCTGGGAT (
6
)
2
0.002
P0.5 retina
TGGAAAATGT (
3
)
2
0.002
P2.5 retina
GAAATGTAAG
(
6
)
84.5
0.0845
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
TGGATGCTGG (
15
)
15.8
0.0158
P2.5 retina
CAGGCAAAAA (
5
)
12.3
0.0123
P2.5 retina
AGCCAAACAA
(
5
)
1.8
0.0018
P2.5 retina
ATTTTTTAAT (
4
)
1.8
0.0018
P2.5 retina
CCTTTAATTC (
36
)
1.8
0.0018
P2.5 retina
GAAACACTAT
(
4
)
1.8
0.0018
P2.5 retina
GAGGGGGAGG
(
4
)
1.8
0.0018
P2.5 retina
GTGCTGGGAT (
6
)
1.8
0.0018
P4.5 retina
GAAATGTAAG
(
6
)
126.8
0.1268
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
CAGGCAAAAA (
5
)
7.9
0.0079
P4.5 retina
CAGGCCCAAA
(
3
)
5.9
0.0059
P4.5 retina
TGGATGCTGG (
15
)
5.9
0.0059
P4.5 retina
AGCCAAACAA
(
5
)
4
0.004
P4.5 retina
CCTTTAATTC (
36
)
4
0.004
P4.5 retina
GAAACACTAT
(
4
)
4
0.004
P4.5 retina
AAAGACACTC
(
3
)
2
0.002
P4.5 retina
GGTGGTGAAC
(
3
)
2
0.002
P6.5 retina
GAAATGTAAG
(
6
)
145.1
0.1451
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
AGCCAAACAA
(
5
)
10
0.01
P6.5 retina
CAGGCCCAAA
(
3
)
8.3
0.0083
P6.5 retina
TGGATGCTGG (
15
)
6.7
0.0067
P6.5 retina
CAGGCAAAAA (
5
)
5
0.005
P6.5 retina
CCTTTAATTC (
36
)
5
0.005
P6.5 retina
AAAGACACTC
(
3
)
3.3
0.0033
P6.5 retina
TGCACTAAAT
(
2
)
3.3
0.0033
P6.5 retina
ACAAACAAAA
(
3
)
1.7
0.0017
P6.5 retina
AGTGGATGAT
(
3
)
1.7
0.0017
P6.5 retina
ATTTTTTAAT (
4
)
1.7
0.0017
P6.5 retina
CAGGCCCAAC (
4
)
1.7
0.0017
P6.5 retina
GAAACACTAT
(
4
)
1.7
0.0017
P6.5 retina
GAGGGGGAGG
(
4
)
1.7
0.0017
P10.5 crx- retina
GAAATGTAAG
(
6
)
133.8
0.1338
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
CAGGCCCAAA
(
3
)
7.4
0.0074
P10.5 crx- retina
TGGATGCTGG (
15
)
5.6
0.0056
P10.5 crx- retina
AAAGACACTC
(
3
)
1.9
0.0019
P10.5 crx- retina
CCACCTGTCT (
5
)
1.9
0.0019
P10.5 crx- retina
CCTTTAATTC (
36
)
1.9
0.0019
P10.5 crx- retina
GAAACACTAT
(
4
)
1.9
0.0019
P10.5 crx- retina
TGATGGCTCA
(
3
)
1.9
0.0019
P10.5 crx- retina
TGCACTAAAT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAAATGTAAG
(
6
)
96.1
0.0961
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
AGCCAAACAA
(
5
)
13.5
0.0135
P10.5 crx+ retina
CTGTTAGTCG
(
4
)
7.7
0.0077
P10.5 crx+ retina
TGGATGCTGG (
15
)
5.8
0.0058
P10.5 crx+ retina
CAGGCCCAAA
(
3
)
3.8
0.0038
P10.5 crx+ retina
CAGGCAAAAA (
5
)
1.9
0.0019
P10.5 crx+ retina
CAGGCCCAAC (
4
)
1.9
0.0019
P10.5 crx+ retina
GAAACACTAT
(
4
)
1.9
0.0019
Adult retinal
GAAATGTAAG
(
6
)
59.2
0.0592
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
AGCCAAACAA
(
5
)
11.1
0.0111
Adult retinal
CAGGCCCAAA
(
3
)
5.6
0.0056
Adult retinal
TGGATGCTGG (
15
)
5.6
0.0056
Adult retinal
ACAAACAAAA
(
3
)
1.9
0.0019
Adult retinal
CAGGCAAAAA (
5
)
1.9
0.0019
Adult retinal
CCTTTAATTC (
36
)
1.9
0.0019
ONL
GAAATGTAAG
(
6
)
99.6
0.0996
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
AGCCAAACAA
(
5
)
7.7
0.0077
ONL
CAGGCAAAAA (
5
)
5.7
0.0057
ONL
CTGTTAGTCG
(
4
)
5.7
0.0057
ONL
CAGGCCCAAA
(
3
)
3.8
0.0038
ONL
CCTTTAATTC (
36
)
3.8
0.0038
ONL
ACCTTCTACT
(
3
)
1.9
0.0019
